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mitoNGS / MToolBox

A bioinformatics pipeline to analyze mtDNA from NGS data
http://sourceforge.net/projects/mtoolbox/?source=navbar
GNU General Public License v3.0
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Can MToolBox run on nanopore data(long read sequencing)? #69

Open pradyumnasagar opened 5 years ago

pradyumnasagar commented 5 years ago

Hi, We are trying to analyse variants in the data obtained from oxford nanopore can we use MToolBox to analyse such data, is long read sequencing data supported by MToolBox?

Thanks and regards, Pradyumna

clody23 commented 5 years ago

Hi Pradyumna,

This version of MToolBox does not support long reads.

However, we are working on a new version of the tool which will likely also be able to deal with long reads, including Nanopore sequencing.

Best regards, Claudia