Despite cim() handling pca and spca object via the same code, their output components are different. This PR adds the $x and $rotation components to the pca object.
This isn't the cleanest fix as it means there is essentially double ups in the pca object. pca.object$x are the variates while pca.object$variates is the contains the same values but is structured a list of length 1. Downstream functions (such as network() and cim() access these components differently. Will clean this up in the future
Despite
cim()handlingpcaandspcaobject via the same code, their output components are different. This PR adds the$xand$rotationcomponents to thepcaobject.This isn't the cleanest fix as it means there is essentially double ups in the
pcaobject.pca.object$xare the variates whilepca.object$variatesis the contains the same values but is structured a list of length 1. Downstream functions (such asnetwork()andcim()access these components differently. Will clean this up in the future