search

mixOmicsTeam / mixOmics

Development repository for the Bioconductor package 'mixOmics '
http://mixomics.org/
157 stars 52 forks source link

Network plot giving error:Edges are too long ?? #304

Closed varun171 closed 6 months ago

varun171 commented 7 months ago

Click the "Preview" tab above to see this in HTML ^^^

I tried to adjust different parameters but network plot is giving error that edges are too long. Any suggestion to generate and save the plot in pdf format.

p <- network(shrink.rcc.count_methyl, comp = 1:2, interactive = TRUE, cex.node.name = 0.5, cex.edge.label = 0.5, lwd.edge = 2, cutoff = 0.8)

By submitting this issue/request, I confirm that:

  1. I am aware that for analysis help I can refer to Discourse to see if my question is already answered or to submit a new one.

  2. I am aware that if I get certain behaviour only using my data and not mixOmics datasets, it is best to send a fully confidential email with the code and (possibly a subset of) the data that reproduce the error to the following email (changing [at] and [dot] to @ and .): mixomics[at]math[dot]univ-toulouse[dot]fr

  3. I have checked that I have the latest version installed, as described here.

  4. I have searched the live NEWS file to see if it has been fixed in devel already. If so, I tried the latest devel version

Thanks! Please delete the instructions above and fill in the items below:

Describe the issue A clear and concise description of what the bug is.

Expected behavior A clear and concise description of what you expected to happen.

Screenshots If applicable, add screenshots to help explain your problem.

Minimal reproducible example (if it is an issue), preferably using the fantastic reprex package:

Output of sessionInfo() (if it is an issue):

sessionInfo()