fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
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Creation of `00_parameter_specification.ipynb` notebook #3
Might be an idea to create a notebook that initiates the JSON parameters. And than executes the notebooks one after the other.
Like this, this would be the only notebook that needs to be executed to run the whole group analysis. It could even have a switch to do univariate or multivariate analysis.
Having everything in one informative notebook makes it also possible to quickly create a BIDS app out of it.
Might be an idea to create a notebook that initiates the JSON parameters. And than executes the notebooks one after the other.
Like this, this would be the only notebook that needs to be executed to run the whole group analysis. It could even have a switch to do univariate or multivariate analysis.
Having everything in one informative notebook makes it also possible to quickly create a BIDS app out of it.