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mjfritz / growthcurves

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General errors when running on just Calcium #2

Open mjfritz opened 4 years ago

mjfritz commented 4 years ago

This may just be because there are too few data points:

C:\Users\mjf123\AppData\Local\Continuum\anaconda3\lib\site-packages\scipy\stats\stats.py:1450: UserWarning: kurtosistest only valid for n>=20 ... continuing anyway, n=18 "anyway, n=%i" % int(n)) C:\Users\mjf123\AppData\Local\Continuum\anaconda3\lib\site-packages\statsmodels\regression\linear_model.py:1657: RuntimeWarning: invalid value encountered in double_scalars return self.ess/self.df_model

Running with only 1 plate with 4 technical replicates of RKS, low, intermediate levels of calcium. .tsv file is pre-formatted to have "time" and "condition.strain.plate.replicate"

mjfritz commented 4 years ago

Also, still not generating all of the plots. Only getting the anovaplot.main figures, but they also aren't showing all of the individual data points. Just the mean bar.