Problems speading/gathering draws from heirarchical model.

I'm having some trouble spreading draws from a heirarchical model. Please see the attatched reprex.

I ran similar code on my other computer which I believe has a previous version of tibble which might be the problem.

library(tidybayes)
library(tidyverse)
#> Warning: package 'tibble' was built under R version 3.6.2
library(brms)
#> Loading required package: Rcpp
#> Loading 'brms' package (version 2.12.0). Useful instructions
#> can be found by typing help('brms'). A more detailed introduction
#> to the package is available through vignette('brms_overview').
#> 
#> Attaching package: 'brms'
#> The following object is masked from 'package:stats':
#> 
#>     ar

sleep = lme4::sleepstudy %>%
  as_tibble() %>%
  mutate(Subject = as.character(Subject))

model = brm(Reaction ~ 1 + Days + (1+Days|Subject), 
            data = sleep)
#> Compiling the C++ model
#> Trying to compile a simple C file
#> Running /Library/Frameworks/R.framework/Resources/bin/R CMD SHLIB foo.c
#> clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I"/Library/Frameworks/R.framework/Versions/3.6/Resources/library/Rcpp/include/"  -I"/Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/"  -I"/Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/unsupported"  -I"/Library/Frameworks/R.framework/Versions/3.6/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.6/Resources/library/StanHeaders/include/src/"  -I"/Library/Frameworks/R.framework/Versions/3.6/Resources/library/StanHeaders/include/"  -I"/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rstan/include" -DEIGEN_NO_DEBUG  -D_REENTRANT  -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -include stan/math/prim/mat/fun/Eigen.hpp   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -c foo.c -o foo.o
#> In file included from <built-in>:1:
#> In file included from /Library/Frameworks/R.framework/Versions/3.6/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
#> In file included from /Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/Eigen/Dense:1:
#> In file included from /Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/Eigen/Core:88:
#> /Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/Eigen/src/Core/util/Macros.h:613:1: error: unknown type name 'namespace'
#> namespace Eigen {
#> ^
#> /Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/Eigen/src/Core/util/Macros.h:613:16: error: expected ';' after top level declarator
#> namespace Eigen {
#>                ^
#>                ;
#> In file included from <built-in>:1:
#> In file included from /Library/Frameworks/R.framework/Versions/3.6/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
#> In file included from /Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/Eigen/Dense:1:
#> /Library/Frameworks/R.framework/Versions/3.6/Resources/library/RcppEigen/include/Eigen/Core:96:10: fatal error: 'complex' file not found
#> #include <complex>
#>          ^~~~~~~~~
#> 3 errors generated.
#> make: *** [foo.o] Error 1
#> Start sampling
#> 
#> SAMPLING FOR MODEL '634787b78b0dfee9effa79a757f95ea3' NOW (CHAIN 1).
#> Chain 1: 
#> Chain 1: Gradient evaluation took 7.2e-05 seconds
#> Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.72 seconds.
#> Chain 1: Adjust your expectations accordingly!
#> Chain 1: 
#> Chain 1: 
#> Chain 1: Iteration:    1 / 2000 [  0%]  (Warmup)
#> Chain 1: Iteration:  200 / 2000 [ 10%]  (Warmup)
#> Chain 1: Iteration:  400 / 2000 [ 20%]  (Warmup)
#> Chain 1: Iteration:  600 / 2000 [ 30%]  (Warmup)
#> Chain 1: Iteration:  800 / 2000 [ 40%]  (Warmup)
#> Chain 1: Iteration: 1000 / 2000 [ 50%]  (Warmup)
#> Chain 1: Iteration: 1001 / 2000 [ 50%]  (Sampling)
#> Chain 1: Iteration: 1200 / 2000 [ 60%]  (Sampling)
#> Chain 1: Iteration: 1400 / 2000 [ 70%]  (Sampling)
#> Chain 1: Iteration: 1600 / 2000 [ 80%]  (Sampling)
#> Chain 1: Iteration: 1800 / 2000 [ 90%]  (Sampling)
#> Chain 1: Iteration: 2000 / 2000 [100%]  (Sampling)
#> Chain 1: 
#> Chain 1:  Elapsed Time: 2.02516 seconds (Warm-up)
#> Chain 1:                1.17721 seconds (Sampling)
#> Chain 1:                3.20237 seconds (Total)
#> Chain 1: 
#> 
#> SAMPLING FOR MODEL '634787b78b0dfee9effa79a757f95ea3' NOW (CHAIN 2).
#> Chain 2: 
#> Chain 2: Gradient evaluation took 6.6e-05 seconds
#> Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.66 seconds.
#> Chain 2: Adjust your expectations accordingly!
#> Chain 2: 
#> Chain 2: 
#> Chain 2: Iteration:    1 / 2000 [  0%]  (Warmup)
#> Chain 2: Iteration:  200 / 2000 [ 10%]  (Warmup)
#> Chain 2: Iteration:  400 / 2000 [ 20%]  (Warmup)
#> Chain 2: Iteration:  600 / 2000 [ 30%]  (Warmup)
#> Chain 2: Iteration:  800 / 2000 [ 40%]  (Warmup)
#> Chain 2: Iteration: 1000 / 2000 [ 50%]  (Warmup)
#> Chain 2: Iteration: 1001 / 2000 [ 50%]  (Sampling)
#> Chain 2: Iteration: 1200 / 2000 [ 60%]  (Sampling)
#> Chain 2: Iteration: 1400 / 2000 [ 70%]  (Sampling)
#> Chain 2: Iteration: 1600 / 2000 [ 80%]  (Sampling)
#> Chain 2: Iteration: 1800 / 2000 [ 90%]  (Sampling)
#> Chain 2: Iteration: 2000 / 2000 [100%]  (Sampling)
#> Chain 2: 
#> Chain 2:  Elapsed Time: 2.27628 seconds (Warm-up)
#> Chain 2:                1.08031 seconds (Sampling)
#> Chain 2:                3.35659 seconds (Total)
#> Chain 2: 
#> 
#> SAMPLING FOR MODEL '634787b78b0dfee9effa79a757f95ea3' NOW (CHAIN 3).
#> Chain 3: 
#> Chain 3: Gradient evaluation took 2.8e-05 seconds
#> Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.28 seconds.
#> Chain 3: Adjust your expectations accordingly!
#> Chain 3: 
#> Chain 3: 
#> Chain 3: Iteration:    1 / 2000 [  0%]  (Warmup)
#> Chain 3: Iteration:  200 / 2000 [ 10%]  (Warmup)
#> Chain 3: Iteration:  400 / 2000 [ 20%]  (Warmup)
#> Chain 3: Iteration:  600 / 2000 [ 30%]  (Warmup)
#> Chain 3: Iteration:  800 / 2000 [ 40%]  (Warmup)
#> Chain 3: Iteration: 1000 / 2000 [ 50%]  (Warmup)
#> Chain 3: Iteration: 1001 / 2000 [ 50%]  (Sampling)
#> Chain 3: Iteration: 1200 / 2000 [ 60%]  (Sampling)
#> Chain 3: Iteration: 1400 / 2000 [ 70%]  (Sampling)
#> Chain 3: Iteration: 1600 / 2000 [ 80%]  (Sampling)
#> Chain 3: Iteration: 1800 / 2000 [ 90%]  (Sampling)
#> Chain 3: Iteration: 2000 / 2000 [100%]  (Sampling)
#> Chain 3: 
#> Chain 3:  Elapsed Time: 2.44934 seconds (Warm-up)
#> Chain 3:                0.714653 seconds (Sampling)
#> Chain 3:                3.164 seconds (Total)
#> Chain 3: 
#> 
#> SAMPLING FOR MODEL '634787b78b0dfee9effa79a757f95ea3' NOW (CHAIN 4).
#> Chain 4: 
#> Chain 4: Gradient evaluation took 3e-05 seconds
#> Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.3 seconds.
#> Chain 4: Adjust your expectations accordingly!
#> Chain 4: 
#> Chain 4: 
#> Chain 4: Iteration:    1 / 2000 [  0%]  (Warmup)
#> Chain 4: Iteration:  200 / 2000 [ 10%]  (Warmup)
#> Chain 4: Iteration:  400 / 2000 [ 20%]  (Warmup)
#> Chain 4: Iteration:  600 / 2000 [ 30%]  (Warmup)
#> Chain 4: Iteration:  800 / 2000 [ 40%]  (Warmup)
#> Chain 4: Iteration: 1000 / 2000 [ 50%]  (Warmup)
#> Chain 4: Iteration: 1001 / 2000 [ 50%]  (Sampling)
#> Chain 4: Iteration: 1200 / 2000 [ 60%]  (Sampling)
#> Chain 4: Iteration: 1400 / 2000 [ 70%]  (Sampling)
#> Chain 4: Iteration: 1600 / 2000 [ 80%]  (Sampling)
#> Chain 4: Iteration: 1800 / 2000 [ 90%]  (Sampling)
#> Chain 4: Iteration: 2000 / 2000 [100%]  (Sampling)
#> Chain 4: 
#> Chain 4:  Elapsed Time: 1.97225 seconds (Warm-up)
#> Chain 4:                1.25315 seconds (Sampling)
#> Chain 4:                3.2254 seconds (Total)
#> Chain 4:

model %>% 
  recover_types(sleep) %>% 
  spread_draws(r_Subject[i,Days])
#> Error: Assigned data `draws[, c(".chain", ".iteration", ".draw")]` must be compatible with existing data.
#> x Existing data has 144000 rows.
#> x Element 1 of assigned data has 4000 rows.
#> ℹ Only vectors of size 1 are recycled.

^{Created on 2020-04-04 by the reprex package (v0.3.0)}

Session info

``` r devtools::session_info() #> ─ Session info ─────────────────────────────────────────────────────────────── #> setting value #> version R version 3.6.0 (2019-04-26) #> os macOS Mojave 10.14.6 #> system x86_64, darwin15.6.0 #> ui X11 #> language (EN) #> collate en_CA.UTF-8 #> ctype en_CA.UTF-8 #> tz America/Toronto #> date 2020-04-04 #> #> ─ Packages ─────────────────────────────────────────────────────────────────── #> package * version date lib source #> abind 1.4-5 2016-07-21 [1] CRAN (R 3.6.0) #> arrayhelpers 1.1-0 2020-02-04 [1] CRAN (R 3.6.0) #> assertthat 0.2.1 2019-03-21 [1] CRAN (R 3.6.0) #> backports 1.1.5 2019-10-02 [1] CRAN (R 3.6.0) #> base64enc 0.1-3 2015-07-28 [1] CRAN (R 3.6.0) #> bayesplot 1.7.1 2019-12-01 [1] CRAN (R 3.6.0) #> boot 1.3-24 2019-12-20 [1] CRAN (R 3.6.0) #> bridgesampling 1.0-0 2020-02-26 [1] CRAN (R 3.6.0) #> brms * 2.12.0 2020-02-23 [1] CRAN (R 3.6.0) #> Brobdingnag 1.2-6 2018-08-13 [1] CRAN (R 3.6.0) #> broom 0.5.5 2020-02-29 [1] CRAN (R 3.6.0) #> callr 3.4.3 2020-03-28 [1] CRAN (R 3.6.2) #> cellranger 1.1.0 2016-07-27 [1] CRAN (R 3.6.0) #> cli 2.0.2 2020-02-28 [1] CRAN (R 3.6.0) #> coda 0.19-3 2019-07-05 [1] CRAN (R 3.6.0) #> codetools 0.2-16 2018-12-24 [1] CRAN (R 3.6.0) #> colorspace 1.4-1 2019-03-18 [1] CRAN (R 3.6.0) #> colourpicker 1.0 2017-09-27 [1] CRAN (R 3.6.0) #> crayon 1.3.4 2017-09-16 [1] CRAN (R 3.6.0) #> crosstalk 1.1.0.1 2020-03-13 [1] CRAN (R 3.6.0) #> DBI 1.1.0 2019-12-15 [1] CRAN (R 3.6.0) #> dbplyr 1.4.2 2019-06-17 [1] CRAN (R 3.6.0) #> desc 1.2.0 2018-05-01 [1] CRAN (R 3.6.0) #> devtools 2.2.2 2020-02-17 [1] CRAN (R 3.6.0) #> digest 0.6.25 2020-02-23 [1] CRAN (R 3.6.0) #> dplyr * 0.8.5 2020-03-07 [1] CRAN (R 3.6.0) #> DT 0.13 2020-03-23 [1] CRAN (R 3.6.0) #> dygraphs 1.1.1.6 2018-07-11 [1] CRAN (R 3.6.0) #> ellipsis 0.3.0 2019-09-20 [1] CRAN (R 3.6.0) #> evaluate 0.14 2019-05-28 [1] CRAN (R 3.6.0) #> fansi 0.4.1 2020-01-08 [1] CRAN (R 3.6.0) #> fastmap 1.0.1 2019-10-08 [1] CRAN (R 3.6.0) #> forcats * 0.5.0 2020-03-01 [1] CRAN (R 3.6.0) #> fs 1.4.0 2020-03-31 [1] CRAN (R 3.6.0) #> generics 0.0.2 2018-11-29 [1] CRAN (R 3.6.0) #> ggplot2 * 3.3.0 2020-03-05 [1] CRAN (R 3.6.0) #> ggridges 0.5.2 2020-01-12 [1] CRAN (R 3.6.0) #> glue 1.3.2 2020-03-12 [1] CRAN (R 3.6.0) #> gridExtra 2.3 2017-09-09 [1] CRAN (R 3.6.0) #> gtable 0.3.0 2019-03-25 [1] CRAN (R 3.6.0) #> gtools 3.8.2 2020-03-31 [1] CRAN (R 3.6.0) #> haven 2.2.0 2019-11-08 [1] CRAN (R 3.6.0) #> highr 0.8 2019-03-20 [1] CRAN (R 3.6.0) #> hms 0.5.3 2020-01-08 [1] CRAN (R 3.6.0) #> htmltools 0.4.0 2019-10-04 [1] CRAN (R 3.6.0) #> htmlwidgets 1.5.1 2019-10-08 [1] CRAN (R 3.6.0) #> httpuv 1.5.2 2019-09-11 [1] CRAN (R 3.6.0) #> httr 1.4.1 2019-08-05 [1] CRAN (R 3.6.0) #> igraph 1.2.5 2020-03-19 [1] CRAN (R 3.6.0) #> inline 0.3.15 2018-05-18 [1] CRAN (R 3.6.0) #> jsonlite 1.6.1 2020-02-02 [1] CRAN (R 3.6.0) #> knitr 1.28 2020-02-06 [1] CRAN (R 3.6.0) #> later 1.0.0 2019-10-04 [1] CRAN (R 3.6.0) #> lattice 0.20-40 2020-02-19 [1] CRAN (R 3.6.0) #> lifecycle 0.2.0 2020-03-06 [1] CRAN (R 3.6.0) #> lme4 1.1-21 2019-03-05 [1] CRAN (R 3.6.0) #> loo 2.2.0 2019-12-19 [1] CRAN (R 3.6.0) #> lubridate 1.7.4 2018-04-11 [1] CRAN (R 3.6.0) #> magrittr 1.5 2014-11-22 [1] CRAN (R 3.6.0) #> markdown 1.1 2019-08-07 [1] CRAN (R 3.6.0) #> MASS 7.3-51.5 2019-12-20 [1] CRAN (R 3.6.0) #> Matrix 1.2-18 2019-11-27 [1] CRAN (R 3.6.0) #> matrixStats 0.56.0 2020-03-13 [1] CRAN (R 3.6.0) #> memoise 1.1.0 2017-04-21 [1] CRAN (R 3.6.0) #> mime 0.9 2020-02-04 [1] CRAN (R 3.6.0) #> miniUI 0.1.1.1 2018-05-18 [1] CRAN (R 3.6.0) #> minqa 1.2.4 2014-10-09 [1] CRAN (R 3.6.0) #> modelr 0.1.6 2020-02-22 [1] CRAN (R 3.6.0) #> munsell 0.5.0 2018-06-12 [1] CRAN (R 3.6.0) #> mvtnorm 1.1-0 2020-02-24 [1] CRAN (R 3.6.0) #> nlme 3.1-145 2020-03-04 [1] CRAN (R 3.6.0) #> nloptr 1.2.2.1 2020-03-11 [1] CRAN (R 3.6.0) #> pillar 1.4.3 2019-12-20 [1] CRAN (R 3.6.0) #> pkgbuild 1.0.6 2019-10-09 [1] CRAN (R 3.6.0) #> pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 3.6.0) #> pkgload 1.0.2 2018-10-29 [1] CRAN (R 3.6.0) #> plyr 1.8.6 2020-03-03 [1] CRAN (R 3.6.0) #> prettyunits 1.1.1 2020-01-24 [1] CRAN (R 3.6.0) #> processx 3.4.2 2020-02-09 [1] CRAN (R 3.6.0) #> promises 1.1.0 2019-10-04 [1] CRAN (R 3.6.0) #> ps 1.3.2 2020-02-13 [1] CRAN (R 3.6.0) #> purrr * 0.3.3 2019-10-18 [1] CRAN (R 3.6.0) #> R6 2.4.1 2019-11-12 [1] CRAN (R 3.6.0) #> Rcpp * 1.0.4 2020-03-17 [1] CRAN (R 3.6.0) #> readr * 1.3.1 2018-12-21 [1] CRAN (R 3.6.0) #> readxl 1.3.1 2019-03-13 [1] CRAN (R 3.6.0) #> remotes 2.1.1 2020-02-15 [1] CRAN (R 3.6.0) #> reprex 0.3.0 2019-05-16 [1] CRAN (R 3.6.0) #> reshape2 1.4.3 2017-12-11 [1] CRAN (R 3.6.0) #> rlang 0.4.5 2020-03-01 [1] CRAN (R 3.6.0) #> rmarkdown 2.1 2020-01-20 [1] CRAN (R 3.6.0) #> rprojroot 1.3-2 2018-01-03 [1] CRAN (R 3.6.0) #> rsconnect 0.8.16 2019-12-13 [1] CRAN (R 3.6.0) #> rstan 2.19.3 2020-02-11 [1] CRAN (R 3.6.0) #> rstantools 2.0.0 2019-09-15 [1] CRAN (R 3.6.0) #> rvest 0.3.5 2019-11-08 [1] CRAN (R 3.6.0) #> scales 1.1.0 2019-11-18 [1] CRAN (R 3.6.0) #> sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 3.6.0) #> shiny 1.4.0.2 2020-03-13 [1] CRAN (R 3.6.0) #> shinyjs 1.1 2020-01-13 [1] CRAN (R 3.6.0) #> shinystan 2.5.0 2018-05-01 [1] CRAN (R 3.6.0) #> shinythemes 1.1.2 2018-11-06 [1] CRAN (R 3.6.0) #> StanHeaders 2.21.0-1 2020-01-19 [1] CRAN (R 3.6.0) #> stringi 1.4.6 2020-02-17 [1] CRAN (R 3.6.0) #> stringr * 1.4.0 2019-02-10 [1] CRAN (R 3.6.0) #> svUnit 0.7-12 2014-03-02 [1] CRAN (R 3.6.0) #> testthat 2.3.2 2020-03-02 [1] CRAN (R 3.6.0) #> threejs 0.3.3 2020-01-21 [1] CRAN (R 3.6.0) #> tibble * 3.0.0 2020-03-30 [1] CRAN (R 3.6.2) #> tidybayes * 2.0.2 2020-03-19 [1] CRAN (R 3.6.0) #> tidyr * 1.0.2 2020-01-24 [1] CRAN (R 3.6.0) #> tidyselect 1.0.0 2020-01-27 [1] CRAN (R 3.6.0) #> tidyverse * 1.3.0 2019-11-21 [1] CRAN (R 3.6.0) #> usethis 1.5.1 2019-07-04 [1] CRAN (R 3.6.0) #> vctrs 0.2.4 2020-03-10 [1] CRAN (R 3.6.0) #> withr 2.1.2 2018-03-15 [1] CRAN (R 3.6.0) #> xfun 0.12 2020-01-13 [1] CRAN (R 3.6.0) #> xml2 1.2.5 2020-03-11 [1] CRAN (R 3.6.0) #> xtable 1.8-4 2019-04-21 [1] CRAN (R 3.6.0) #> xts 0.12-0 2020-01-19 [1] CRAN (R 3.6.0) #> yaml 2.2.1 2020-02-01 [1] CRAN (R 3.6.0) #> zoo 1.8-7 2020-01-10 [1] CRAN (R 3.6.0) #> #> [1] /Library/Frameworks/R.framework/Versions/3.6/Resources/library ```

mjskay / tidybayes

Problems speading/gathering draws from heirarchical model. #242