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mjsull / Easyfig

Development version of Easyfig
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Compare a genomic region #24

Open CFmicro opened 4 years ago

CFmicro commented 4 years ago

I have a genome contig of about 30 kbp that I did an annotation using RAST and I downloaded as EMBL and also as Genbank file to compare with a plasmid in the NCBI database. When I insert the EMBL file or the Genbank file and the reference plasmid (NCBI) in easyfig, I got only the genes as arrows in the reference plasmid and my sequence appears as a black line without the arrows. How can I add the arrows as genes by using a RAST annotation?

Thanks in advance!

Comparison seq

MarcoMontesdeOca commented 3 years ago

Maybe your annotation file does not include a /gene feature for each CDS. In that case try selecting the 'CDS' option as arrows in the Annotation menu.