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mjsull / Easyfig

Development version of Easyfig
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Easyfig not saving Blast output files #37

Open AllisonStander opened 3 years ago

AllisonStander commented 3 years ago

Good day,

I have downloaded and extracted Easyfig_2.2.2_linux.tar.gz from https://mjsull.github.io/Easyfig/files.html.

When I run Easyfig on the command line I get the following message: 

Fontconfig warning: line 5: unknown element "its:rules"
Fontconfig warning: line 6: unknown element "its:translateRule"
Fontconfig error: line 6: invalid attribute 'translate'
Fontconfig error: line 6: invalid attribute 'selector'
Fontconfig error: line 7: invalid attribute 'xmlns:its'
Fontconfig error: line 7: invalid attribute 'version'
Fontconfig warning: line 9: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/10-hinting-slight.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/10-hinting-slight.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/10-hinting-slight.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/10-hinting-slight.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/10-hinting-slight.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/10-hinting-slight.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/10-hinting-slight.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/11-lcdfilter-default.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/11-lcdfilter-default.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/11-lcdfilter-default.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/11-lcdfilter-default.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/11-lcdfilter-default.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/11-lcdfilter-default.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/11-lcdfilter-default.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/30-metric-aliases.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/30-metric-aliases.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/30-metric-aliases.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/30-metric-aliases.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/30-metric-aliases.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/30-metric-aliases.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/30-metric-aliases.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/40-nonlatin.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/40-nonlatin.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/40-nonlatin.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/40-nonlatin.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/40-nonlatin.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/40-nonlatin.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/40-nonlatin.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/45-generic.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/45-generic.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/45-generic.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/45-generic.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/45-generic.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/45-generic.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/45-generic.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/45-latin.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/45-latin.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/45-latin.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/45-latin.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/45-latin.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/45-latin.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/45-latin.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/49-sansserif.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/49-sansserif.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/49-sansserif.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/49-sansserif.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/49-sansserif.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/49-sansserif.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/49-sansserif.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/50-user.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/50-user.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/50-user.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/50-user.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/50-user.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/50-user.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/50-user.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/51-local.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/51-local.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/51-local.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/51-local.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/51-local.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/51-local.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/51-local.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/60-generic.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/60-generic.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/60-generic.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/60-generic.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/60-generic.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/60-generic.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/60-generic.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/60-latin.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/60-latin.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/60-latin.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/60-latin.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/60-latin.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/60-latin.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/60-latin.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/65-fonts-persian.conf", line 34: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/65-fonts-persian.conf", line 35: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/65-fonts-persian.conf", line 35: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/65-fonts-persian.conf", line 35: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/65-fonts-persian.conf", line 36: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/65-fonts-persian.conf", line 36: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/65-nonlatin.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/65-nonlatin.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/65-nonlatin.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/65-nonlatin.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/65-nonlatin.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/65-nonlatin.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/65-nonlatin.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/69-unifont.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/69-unifont.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/69-unifont.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/69-unifont.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/69-unifont.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/69-unifont.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/70-no-bitmaps.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/70-no-bitmaps.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/70-no-bitmaps.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/70-no-bitmaps.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/70-no-bitmaps.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/70-no-bitmaps.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/70-no-bitmaps.conf", line 8: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/80-delicious.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/80-delicious.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/80-delicious.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/80-delicious.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/80-delicious.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/80-delicious.conf", line 6: invalid attribute 'version'
Fontconfig warning: "/etc/fonts/conf.d/90-synthetic.conf", line 4: unknown element "its:rules"
Fontconfig warning: "/etc/fonts/conf.d/90-synthetic.conf", line 5: unknown element "its:translateRule"
Fontconfig error: "/etc/fonts/conf.d/90-synthetic.conf", line 5: invalid attribute 'translate'
Fontconfig error: "/etc/fonts/conf.d/90-synthetic.conf", line 5: invalid attribute 'selector'
Fontconfig error: "/etc/fonts/conf.d/90-synthetic.conf", line 6: invalid attribute 'xmlns:its'
Fontconfig error: "/etc/fonts/conf.d/90-synthetic.conf", line 6: invalid attribute 'version'
Fontconfig error: Cannot load default config file
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
/usr/bin/google-chrome-stable: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /lib/x86_64-linux-gnu/libpng16.so.16)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
makeblastdb: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)
blastn: /home/allison/Programs/Easyfig_2.2.2_linux/libz.so.1: version `ZLIB_1.2.9' not found (required by /usr/lib/ncbi-blast+/libxcompress.so)

It does, however run the GUI. I have chosen the Blast location, and the program will create and save the Blast output files correctly the first time, but after that it does not save the .out files to the directory.

Can you please help me resolve this issue?

I have attached a screenshot of the error message. image

Kind regards, Allison

Batstaph commented 3 years ago

I am having a similar problem. I have been running easyfig for a couple of years and recently started problems. I've just upgraded to Ubuntu 20.04. I've re-downloaded easyfig but still the same issue.

AllisonStander commented 3 years ago

@Batstaph I was also trying to run EasyFig on Ubuntu 20.04.1. Seems like it might be the issue.

Batstaph commented 3 years ago

I've tried this with a fresh download of easyfig and BLAST on a clean Linux MX distro and get the same problem. It runs correctly the first time then fails to generate the BLAST .out files.

mjsull commented 3 years ago

Hi all,

Are you running the python script? or the Linux tar?

Could you try running https://github.com/mjsull/Easyfig/releases/download/2.2.5/Easyfig.py from the terminal and see if you get the same issues?

Thanks,

Mitch

Batstaph commented 3 years ago

When I run: kay@kay-ThinkPad-X1-Carbon-5th:/Tools/Easyfig_2.2.2_linux$ python Easyfig.py File "Easyfig.py", line 406 raise AttributeError, "Color is immutable" ^ SyntaxError: invalid syntax

mjsull commented 3 years ago

Hi @Batstaph

You'll need to run it with Python 2.7.

Batstaph commented 3 years ago

Sorry but I can't get easyfig.py to find the tkinter module. Did a fresh install on Windows 10 and I am getting the same error message: File not found. This is really frustrating. I've been using easyfig fine for over a year and just when I need it to finish the final chapter of my thesis it's failed. I'm going away to cry.

vrbouza commented 2 years ago

Hi, I faced the same issue and found that the problem was related with the library zlib that blast uses. The thing is that somwhow my blast, although centrally installed (in an Ubuntu 20.04 LTS GNU/Linux system), ended up picking the zlib file that easyfig ships. I had to move the zlib file from the folder to another name (.old) and create a symlink from the zlib same file that I had in /lib/x86_64blabla/.so to the same folder. With it, it run flawlessly. This seems like a bug from the side of the software packaged. I hope this helps.