moshi4
commented
2 years ago Maybe it is because only gene features are targeted for visualization.
Sometimes gene features are missing in Genbank format files.
You may get a proper visualization figure by setting CDS feature as a visualization target from the annotation options screen.
Hello! i've been attempting to visualize some comparisons between some viral genomes i've identified from environmental samples and those matching references in NCBI's database following blast comparisons. It appears as though one of my reference genomes does not have all of the genes laid out and my own identified genome is also lacking any sort of genes along the segment. I was wondering if this is likely due to a formatting issue within my .gbk files or if this is something others have experienced as a result of issues pertaining to the program. For reference...in the image, I have a reference genome at the top that is populated with what appears to be all of the proper genes. In the middle is my own identified genome that lacks any sort of genes on the segment. At the bottom, we have another reference genome downloaded from ncbi that appears to be incomplete. Any and all help on the matter would be greatly appreciated! Thanks for your time.