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mjsull / chromatiblock

Colinear block visualisation tool
GNU General Public License v3.0
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Question regarding -gb #14

Open camilo-monge opened 3 years ago

camilo-monge commented 3 years ago

Hello!

I´ve been using Chromatiblock, and have managed to produce apparently correct visualizations. I´ve tried adding a protein list containing various aminoacid sequences for annotation using -gb, however, some of these (which I am sure exist in the genome, given that I am taking the protein annotations from those genomes for the visualization) are not showing. I would then like to know if there is a maximum number of proteins to be displayed, or a minimum distance between them that exist for them to be shown.

Thanks in advance!

mjsull commented 5 months ago

Hi, there shouldn't be, possibly they are being stacked on top of each other. If you produce and SVG and open it in something like Inkscape you should be able to tell if that is happening. If it isn't do you mind sending me the files that aren't working and I'll bugcheck.