is this something wrong on the continuumIO/conda side?

johannct commented 8 years ago

Hello, I tried to use the bootstrap script to install conda, but there seems to be something botched when conda tries to install additional packages : cohen@port-jct:~/lsst/dm/conda-lsst$ bash bin/bootstrap.sh % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 24.2M 100 24.2M 0 0 1233k 0 0:00:20 0:00:20 --:--:-- 1344k PREFIX=/home/cohen/lsst/dm/conda-lsst/miniconda installing: _cache-0.0-py27_x0 ... installing: python-2.7.11-0 ... installing: conda-env-2.4.5-py27_0 ... installing: openssl-1.0.2d-0 ... installing: pycosat-0.6.1-py27_0 ... installing: pyyaml-3.11-py27_1 ... installing: readline-6.2-2 ... installing: requests-2.9.0-py27_0 ... installing: sqlite-3.8.4.1-1 ... installing: tk-8.5.18-0 ... installing: yaml-0.1.6-0 ... installing: zlib-1.2.8-0 ... installing: conda-3.19.0-py27_0 ... installing: pycrypto-2.6.1-py27_0 ... installing: pip-7.1.2-py27_0 ... installing: wheel-0.26.0-py27_1 ... installing: setuptools-18.8.1-py27_0 ... Python 2.7.11 :: Continuum Analytics, Inc. creating default environment... installation finished. Fetching package metadata: .... Solving package specifications: ........................ Package plan for installation in environment /home/cohen/lsst/dm/conda-lsst/miniconda:

The following packages will be downloaded:

package	build
openssl-1.0.2f	0 3.2 MB
patchelf-0.8	0 258 KB
sqlite-3.9.2	0 3.9 MB
markupsafe-0.23	py27_0 30 KB
requests-2.9.1	py27_0 605 KB
setuptools-19.4	py27_0 365 KB
sqlalchemy-1.0.11	py27_0 1.3 MB
jinja2-2.8	py27_0 263 KB
pip-8.0.1	py27_0 1.5 MB
conda-build-1.18.2	py27_0 207 KB

------------------------------------------------------------
                                       Total:        11.6 MB

The following NEW packages will be INSTALLED:

conda-build: 1.18.2-py27_0
jinja2:      2.8-py27_0   
markupsafe:  0.23-py27_0  
patchelf:    0.8-0        
sqlalchemy:  1.0.11-py27_0

The following packages will be UPDATED:

openssl:     1.0.2d-0      --> 1.0.2f-0     
pip:         7.1.2-py27_0  --> 8.0.1-py27_0 
requests:    2.9.0-py27_0  --> 2.9.1-py27_0 
setuptools:  18.8.1-py27_0 --> 19.4-py27_0  
sqlite:      3.8.4.1-1     --> 3.9.2-0

Fetching packages ... Error: Could not open u'/home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part' for writing (seek).

I do not understand why it would want to open a file that seems to be a partial download.... But note that the file is there : cohen@port-jct:~/lsst/dm/conda-lsst$ ls /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2* /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part

/home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2d-0: bin include info lib ssl

any idea or a pointer to let conda folks know?

jhoblitt commented 8 years ago

That is likely a local I/O error due to permissions or a full volume.

mjuric commented 8 years ago

Yes, looks like you're out of space or over quota?

johannct commented 8 years ago

weird.... I am on my laptop, and I still have plenty of space according to df. I removed 8GB for the sake of it, and the problem persists. I even copied the part file in place just to convince myself that I can add files in the same directory : Fetching packages ... Error: Could not open u'/home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part' for writing (seek). cohen@port-jct:~/lsst/dm/conda-lsst$ cp /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part2 cohen@port-jct:~/lsst/dm/conda-lsst$ cp /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part3 cohen@port-jct:~/lsst/dm/conda-lsst$ ls -ltr /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part* -rw-rw-r-- 1 cohen cohen 16384 janv. 30 07:10 /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part -rw-rw-r-- 1 cohen cohen 16384 janv. 30 07:11 /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part2 -rw-rw-r-- 1 cohen cohen 16384 janv. 30 07:11 /home/cohen/lsst/dm/conda-lsst/miniconda/pkgs/openssl-1.0.2f-0.tar.bz2.part3

no problem whatsoever.... still baffled.

mjuric commented 8 years ago

What happens if you remove openssl-1.0.2f-0.tar.bz2.part?

Btw., this seems to be a conda problem -- googling uncovered:

I'll close this issue as it's not caused by our recipes -- could you follow up with the conda team on https://github.com/ContinuumIO/anaconda-issues/issues/416 ?

johannct commented 8 years ago

thanks for the pointer Mario!

On 01/02/2016 04:51, Mario Juric wrote:

Closed #43 https://github.com/mjuric/conda-lsst/issues/43.

— Reply to this email directly or view it on GitHub https://github.com/mjuric/conda-lsst/issues/43#event-533603983.

mjuric / conda-lsst

is this something wrong on the continuumIO/conda side? #43