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mjz1
/
scatools
Tools for processing scATAC data
https://mjz1.github.io/scatools/
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Bin functions don't work with other genomes
#17
mjz1
closed
8 months ago
0
Bin QC function
#16
mjz1
opened
1 year ago
0
`cnaHeatmap` improvements
#14
mjz1
opened
1 year ago
0
rebinning sce function
#13
mjz1
closed
1 year ago
0
Rebinning function
#12
mjz1
closed
1 year ago
1
Dropping bins in some samples
#10
mjz1
opened
1 year ago
0
Replace all loggers
#9
mjz1
opened
1 year ago
0
Iterative subclone rephasing
#8
mjz1
opened
1 year ago
0
Implement multipcf segmentation
#7
mjz1
opened
1 year ago
0
chr-arm aware segmentation
#6
mjz1
opened
1 year ago
0
Remove fragments in blacklist regions before binning
#5
mjz1
closed
1 year ago
0
Chromosome mappability tracks
#4
mjz1
opened
2 years ago
1
Chr bins by chr arm
#3
mjz1
closed
1 year ago
0
cnaHeatmap multiple gene labels in single bin
#2
mjz1
opened
2 years ago
0
Genes in bin highlighting
#1
mjz1
closed
2 years ago
0