Closed miyakokodama closed 2 years ago
Hi Miyako,
Thanks for your interest in Jasmine!
1) SUPP_EXT is different from SUPP in that it is preserved across multiple merges, so if your input VCFs consist of already merged variants, then the resulting SUPP_EXT value will be the sum of the SUPP_EXT value from all of the input VCFs where a variant is present, while the SUPP value will just be the number of VCF files the variant is present in.
2) That's a good point - thank you for pointing it out! I have made the change in the Github repo so that it will be incorporated into the next release.
Best, Melanie
Hi Melanie,
Thanks for your reply! That would be great - I look forward to the next version :)
Thanks, Miyako
Hi! Thanks for developing Jasmine - it looks really useful! :)
I have two quick questions; 1) what is the difference between "SUPP" and "SUPP_EXT" in the output, as they appear to be identical? 2) At the moment "SUPP" is defined as string - do you plan on changing this to float in the future for easier filtering?
Many thanks in advance! Miyako