I just found this and started using it, and it has been helpful, but I think I found a bug. Please check line 1690 in the getSuvival() function "if(dim(dataObject@RNASeq2GeneNorm)[1] > 0 & dim(dataObject@RNASeqGene)[2] > 0){validMatrix <- append(validMatrix,"RNASeq2")}" I think it is supposed to check the dim of RNASeq2GeneNorm in the second dim call, and not RNASeqGene.
I just found this and started using it, and it has been helpful, but I think I found a bug. Please check line 1690 in the getSuvival() function "if(dim(dataObject@RNASeq2GeneNorm)[1] > 0 & dim(dataObject@RNASeqGene)[2] > 0){validMatrix <- append(validMatrix,"RNASeq2")}" I think it is supposed to check the dim of RNASeq2GeneNorm in the second dim call, and not RNASeqGene.