[docker] Jupyter notebook demonstrating integration workflows

[jastier]

Docker image with notebooks

### Tasks
- [x] Add Jupyter support in a skema image (if not already present)
- [x] Add example notebooks to https://github.com/ml4ai/ASKEM-TA1-DockerVM (see  https://github.com/ml4ai/skema/tree/main/notebooks for examples)

Relates to ml4ai/skema#213

[myedibleenso]

Add the following higher-level REST endpoints to create for TA-1 Service Architecture:

SKEMA-side:

• [ ] [PDF(s)] to [TR Extractions]
  • orchestrates call to UWisc COSMOS
• [ ] [Code + optional PDF(s) + PN,RegNet choice] to [AMR+metadata]
  • supports: model extraction from code
• [ ] [AMR + PDF(s) + PN,RegNet choice] to [AMR+metadata]
  • supports: model metadata enrichment
• [ ] [Eqn (image, latex, MathML) + PN,RegNet choice] to [AMR (PN, RegNet)]
  • supports: model curation

MIT-side:

• [ ] [Dataset headers + PDF(s)] to [Data+Metadata/DKGgrounding (Terrarium DataSheet template)]
  • supports: dataset metadata enrichment

architecture-TA1-service.pdf [SKEMA google drive]

[enoriega]

I think this should go under https://github.com/ml4ai/ASKEM-TA1-DockerVM