Reproduce the results of secondary structure prediction

ml4bio / RNA-FM

RNA foundation model

https://ml4bio.github.io/RNA-FM/

MIT License

190 stars 18 forks source link

Reproduce the results of secondary structure prediction #5

Open Ziyang-Yu opened 9 months ago

Ziyang-Yu commented 9 months ago

Hi,

I use the data archiveII_all from e2efold on task secondary structure pred and get the pair using L/5. But the accuracy is 0.7138. Could you please give more details on how to reproduce results.

mydkzgj commented 9 months ago

Hi, I have uploaded to our gdrive the weight file trained on RNAStralign, named as "RNA-FM-ResNet_RNAStralign.pth". You can try this file with your ArchiveII-related experiments.