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mllg / batchtools

Tools for computation on batch systems
https://mllg.github.io/batchtools/
GNU Lesser General Public License v3.0
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Question: Example for using batch system #161

Closed pekosro closed 6 years ago

pekosro commented 6 years ago

Hi, I'm looking for some example to submit a number of jobs to an existing openlava(or LSF) queue. All nodes seeing the same file system. What has to be done ?

mllg commented 6 years ago

Did you try to follow the setup instructions in the vignette https://mllg.github.io/batchtools/articles/batchtools.html? You need to create (a) a config file which calls makeClusterFunctionsOpenLava() and (b) write a template file (or adjust an existing one to your needs).