qstat list fix - Githubissues

mllg / batchtools

Tools for computation on batch systems

https://mllg.github.io/batchtools/

GNU Lesser General Public License v3.0

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qstat list fix #213

Closed gluque closed 5 years ago

gluque commented 5 years ago

At least in our SGE cluster, the qstat command does not recognize the quotes around -u $USER. After removing the quotes, we are now able to submit jobs from a different host that has no access to the SGE programs (qsub/qstat).

coveralls commented 5 years ago

Coverage remained the same at 87.506% when pulling daf971de89c55a60a6900faaa11adde32ef694c5 on gluque:master into da3988edd1589506562ae0c633d2a04f38cc5172 on mllg:master.

mllg commented 5 years ago

It is working with and without quotes on the Slurm systems I have access to. I've removed the quotes, keep the fingers crossed that this does not break other systems.