search

mllg / batchtools

Tools for computation on batch systems
https://mllg.github.io/batchtools/
GNU Lesser General Public License v3.0
170 stars 51 forks source link

Socket parallelization + resizing the terminal window = crash #233

Open ryananeff opened 5 years ago

ryananeff commented 5 years ago

Submitting 55 jobs in 55 chunks using cluster functions 'Socket' ... Submitting [============>--------------------------------------] 25% eta: 47m Error in unserialize(socklist[[n]]) : 'connection' must be a connection

ryananeff commented 4 years ago

To add to this error message: It seems to happen when you resize the terminal window when you are running batchtools inside a screen (I'm not making this up!)

ryananeff commented 4 years ago

Any updates as to this issue? It is a problem when running long jobs, as I want to be able to see the progress bar and detach/reattach/resize the window.

HenrikBengtsson commented 4 years ago

I think the batchtools maintainers need more information from you than this in order to say anything useful or even comment on this, e.g. R version, session info, operating system, in what type of terminal, size of data/analysis, batchtools backend, etc. A minimal reproducible self-contained example is known to have solved many problems. It might also help others who might say "yup, I've got exactly this problem".