mmore500 / hstrat

hstrat enables phylogenetic inference on distributed digital evolution populations
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Add diagnostic features to alifestd support #129

Closed mmore500 closed 1 year ago

codecov[bot] commented 1 year ago

Codecov Report

All modified lines are covered by tests :white_check_mark:

Comparison is base (20feda3) 97.58% compared to head (eb4acc9) 91.55%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #129 +/- ## ========================================== - Coverage 97.58% 91.55% -6.04% ========================================== Files 608 609 +1 Lines 8255 8349 +94 ========================================== - Hits 8056 7644 -412 - Misses 199 705 +506 ``` | [Flag](https://app.codecov.io/gh/mmore500/hstrat/pull/129/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno) | Coverage Δ | | |---|---|---| | [tests](https://app.codecov.io/gh/mmore500/hstrat/pull/129/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno) | `91.55% <100.00%> (-6.04%)` | :arrow_down: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#carryforward-flags-in-the-pull-request-comment) to find out more. | [Files](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno) | Coverage Δ | | |---|---|---| | [hstrat/\_auxiliary\_lib/\_\_init\_\_.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19faW5pdF9fLnB5) | `100.00% <100.00%> (ø)` | | | [...\_lib/\_alifestd\_find\_chronological\_inconsistency.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19hbGlmZXN0ZF9maW5kX2Nocm9ub2xvZ2ljYWxfaW5jb25zaXN0ZW5jeS5weQ==) | `100.00% <100.00%> (ø)` | | | [...iliary\_lib/\_alifestd\_is\_chronologically\_ordered.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19hbGlmZXN0ZF9pc19jaHJvbm9sb2dpY2FsbHlfb3JkZXJlZC5weQ==) | `100.00% <100.00%> (ø)` | | | [hstrat/\_auxiliary\_lib/\_alifestd\_validate.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19hbGlmZXN0ZF92YWxpZGF0ZS5weQ==) | `100.00% <100.00%> (ø)` | | | [hstrat/\_auxiliary\_lib/\_jit.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19qaXQucHk=) | `100.00% <100.00%> (ø)` | | | [hstrat/\_auxiliary\_lib/\_jit\_TypingError.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19qaXRfVHlwaW5nRXJyb3IucHk=) | `100.00% <100.00%> (ø)` | | | [hstrat/\_auxiliary\_lib/\_jit\_numba\_dict\_t.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19qaXRfbnVtYmFfZGljdF90LnB5) | `100.00% <ø> (+18.18%)` | :arrow_up: | | [...trat/\_auxiliary\_lib/\_jit\_numba\_integer\_array\_ts.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19qaXRfbnVtYmFfaW50ZWdlcl9hcnJheV90cy5weQ==) | `100.00% <ø> (ø)` | | | [hstrat/\_auxiliary\_lib/\_jit\_numpy\_bool\_t.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19qaXRfbnVtcHlfYm9vbF90LnB5) | `100.00% <ø> (+25.00%)` | :arrow_up: | | [hstrat/\_auxiliary\_lib/\_jit\_numpy\_int64\_t.py](https://app.codecov.io/gh/mmore500/hstrat/pull/129?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno#diff-aHN0cmF0L19hdXhpbGlhcnlfbGliL19qaXRfbnVtcHlfaW50NjRfdC5weQ==) | `100.00% <ø> (+25.00%)` | :arrow_up: | ... and [83 files with indirect coverage changes](https://app.codecov.io/gh/mmore500/hstrat/pull/129/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Matthew+Andres+Moreno)

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