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mmp2 / megaman

megaman: Manifold Learning for Millions of Points
http://mmp2.github.io/megaman/
BSD 2-Clause "Simplified" License
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Make test failed with ERROR: Failure: ImportError (No module named _check_build #99

Open ffancheng opened 3 years ago

ffancheng commented 3 years ago

Hi there, I am having trouble installing the package either from conda or source following the instructions. I am using macosx-10.7-x86_64 with Python 2.7. Also failed on Python 3.5 and 3.6.

(manifold_env) /tmp/megaman(master) $make test mkdir -p /tmp/megaman python setup.py install Cythonizing sources megaman/__check_build/_check_build.pyx has not changed megaman/geometry/cyflann/index.pyx has not changed Compiling FLANN with FLANN_ROOT=/Users/fche0019/miniconda3/envs/manifold_env running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "megaman.__check_build._check_build" sources building extension "megaman.geometry/cyflann.index" sources building data_files sources build_src: building npy-pkg config files running build_py running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext customize UnixCCompiler customize UnixCCompiler using build_ext running install_lib running install_data running install_egg_info Removing /Users/fche0019/miniconda3/envs/manifold_env/lib/python2.7/site-packages/megaman-0.3.dev0-py2.7.egg-info Writing /Users/fche0019/miniconda3/envs/manifold_env/lib/python2.7/site-packages/megaman-0.3.dev0-py2.7.egg-info running install_clib customize UnixCCompiler cd /tmp/megaman && nosetests megaman E

ERROR: Failure: ImportError (No module named _check_build

Contents of /private/tmp/megaman/megaman/__check_build: init.py setup.pyc _check_build.c setup.py init.pyc _check_build.pyx

It seems that megaman has not been built correctly.

If you have installed megaman from source, please do not forget to build the package before using it: run python setup.py install in the source directory.

If you have used an installer, please check that it is suited for your Python version, your operating system and your platform.)

Traceback (most recent call last): File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName addr.filename, addr.module) File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath return self.importFromDir(dir_path, fqname) File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir mod = load_module(part_fqname, fh, filename, desc) File "/private/tmp/megaman/megaman/init.py", line 7, in from . import check_build File "/private/tmp/megaman/megaman/__check_build/init.py", line 56, in raise_build_error(e) File "/private/tmp/megaman/megaman/check_build/init.py", line 51, in raise_build_error msg=msg)) ImportError: No module named _check_build

Contents of /private/tmp/megaman/megaman/__check_build: init.py setup.pyc _check_build.c setup.py init.pyc _check_build.pyx

It seems that megaman has not been built correctly.

If you have installed megaman from source, please do not forget to build the package before using it: run python setup.py install in the source directory.

If you have used an installer, please check that it is suited for your Python version, your operating system and your platform.

Ran 1 test in 0.001s

FAILED (errors=1) make: *** [test] Error 1

ffancheng commented 3 years ago

Please find below the make test output for Python 3.5.

(manifold_env) /tmp/megaman   master  make test mkdir -p /tmp/megaman python setup.py install Cythonizing sources megaman/__check_build/_check_build.pyx has not changed megaman/geometry/cyflann/index.pyx has not changed Compiling FLANN with FLANN_ROOT=/Users/fche0019/miniconda3/envs/manifold_env running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "megaman.__check_build._check_build" sources building extension "megaman.geometry/cyflann.index" sources building data_files sources build_src: building npy-pkg config files running build_py running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext customize UnixCCompiler

['/usr/bin/clang', '-Wno-unused-result', '-Wsign-compare', '-Wunreachable-code', '-DNDEBUG', '-g', '-fwrapv', '-O3', '-Wall', '-Wstrict-prototypes', '-I/Users/fche0019/miniconda3/envs/manifold_env/include', '-arch', 'x86_64', '-I/Users/fche0019/miniconda3/envs/manifold_env/include', '-arch', 'x86_64', '-I/usr/local/opt/zlib/include', '-I/usr/local/opt/bzip2/include']

customize UnixCCompiler using build_ext running install_lib running install_data running install_egg_info Removing /Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/site-packages/megaman-0.3.dev0-py3.5.egg-info Writing /Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/site-packages/megaman-0.3.dev0-py3.5.egg-info running install_clib customize UnixCCompiler cd /tmp/megaman && nosetests megaman E

ERROR: Failure: ImportError (No module named 'megaman.__check_build._check_build'

Contents of /private/tmp/megaman/megaman/__check_build: init.py pycache setup.pyc _check_build.c setup.py init.pyc _check_build.pyx

It seems that megaman has not been built correctly.

If you have installed megaman from source, please do not forget to build the package before using it: run python setup.py install in the source directory.

If you have used an installer, please check that it is suited for your Python version, your operating system and your platform.)

Traceback (most recent call last): File "/private/tmp/megaman/megaman/check_build/init.py", line 54, in from ._check_build import check_build ImportError: No module named 'megaman.check_build._check_build'

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/site-packages/nose/failure.py", line 39, in runTest raise self.exc_val.with_traceback(self.tb) File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/site-packages/nose/loader.py", line 418, in loadTestsFromName addr.filename, addr.module) File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/site-packages/nose/importer.py", line 47, in importFromPath return self.importFromDir(dir_path, fqname) File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/site-packages/nose/importer.py", line 94, in importFromDir mod = load_module(part_fqname, fh, filename, desc) File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/imp.py", line 245, in load_module return load_package(name, filename) File "/Users/fche0019/miniconda3/envs/manifold_env/lib/python3.5/imp.py", line 217, in load_package return _load(spec) File "", line 693, in _load File "", line 673, in _load_unlocked File "", line 697, in exec_module File "", line 222, in _call_with_frames_removed File "/private/tmp/megaman/megaman/init.py", line 7, in from . import check_build File "/private/tmp/megaman/megaman/__check_build/init.py", line 56, in raise_build_error(e) File "/private/tmp/megaman/megaman/check_build/init.py", line 51, in raise_build_error msg=msg)) ImportError: No module named 'megaman.__check_build._check_build'

Contents of /private/tmp/megaman/megaman/__check_build: init.py pycache setup.pyc _check_build.c setup.py init.pyc _check_build.pyx

It seems that megaman has not been built correctly.

If you have installed megaman from source, please do not forget to build the package before using it: run python setup.py install in the source directory.

If you have used an installer, please check that it is suited for your Python version, your operating system and your platform.

Ran 1 test in 0.001s

FAILED (errors=1) make: *** [test] Error 1

ffancheng commented 3 years ago

@jmcq89 @mmp2