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mmzdouc / FERMO

Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.
https://fermo.bioinformatics.nl/example
MIT License
28 stars 2 forks source link

Callback error updating featureinfo_out.data #8

Closed mariannaiorio closed 1 year ago

mariannaiorio commented 1 year ago

Hi Mitjia, sorry for being annoying... I received another error by analyzing the data selecting "SPEC.+TREND" and focusing on one network:

Traceback (most recent call last): File "C:\Users\Marianna\Downloads\FERMO\FERMO-main\FERMO-main\src\fermo\app.py", line 1484, in update_selected_feature return modify_feature_info_df( File "C:\Users\Marianna\anaconda3\envs\FERMO\lib\site-packages\fermo\app_utils\dashboard_functions.py", line 1282, in modify_feature_info_df str(sample_stats['original_bioactivity'][sample]), ' (', KeyError: '17411.mzML'

Thanks for your help!

mmzdouc commented 1 year ago

Hi Marianna,

no, you are not annoying at all! Quite the contrary - thank you very much for the bug report!

The reason for the KeyError was an unconsidered conditional in dashboard_functions.py, which was not caught during initial testing.

The issue was fixed in the latest release 0.8.10.