Closed drammock closed 1 year ago
When trying to load a file saved about a year ago, read_connectivity crashes (traceback below).
read_connectivity
Here's a file that fails this way: http://dan.mccloy.info/f2f-f2f_009-attend-theta-band-7sec-envelope-correlation.nc
from mne_connectivity import read_connectivity read_connectivity('f2f-f2f_009-attend-theta-band-7sec-envelope-correlation.nc')
the file is loaded.
--------------------------------------------------------------------------- KeyError Traceback (most recent call last) ~/Documents/academics/research/ilabs/ftof/connectivity/analysis/make-xarrays.py in <module> 78 conn_fname = (f'{slug}-{n_sec}sec-envelope-correlation.nc') 79 conn_fpath = os.path.join(conn_dir, conn_fname) ---> 80 conn = mne_connectivity.read_connectivity(conn_fpath) 81 # envelope correlations 82 conn_matrix = conn.get_data('dense').squeeze() /opt/mne/connectivity/mne_connectivity/io.py in read_connectivity(fname) 99 100 # get the data as a new connectivity container --> 101 conn = _xarray_to_conn(conn_da, cls_func) 102 return conn /opt/mne/connectivity/mne_connectivity/io.py in _xarray_to_conn(array, cls_func) 45 46 # write event IDs ---> 47 event_id_keys = np.atleast_1d(array.attrs.pop('event_id_keys')).tolist() 48 event_id_vals = np.atleast_1d(array.attrs.pop('event_id_vals')).tolist() 49 event_id = {key: val for key, val in zip(event_id_keys, event_id_vals)} KeyError: 'event_id_keys'
looks like it was caused by #58 if I had to venture a guess.
Describe the bug
When trying to load a file saved about a year ago,
read_connectivity
crashes (traceback below).Steps to reproduce
Here's a file that fails this way: http://dan.mccloy.info/f2f-f2f_009-attend-theta-band-7sec-envelope-correlation.nc
Expected results
the file is loaded.
Actual results
Additional information
looks like it was caused by #58 if I had to venture a guess.