mobidic / SEAL

SEAL db - Simple, Efficient And Lite database for NGS
GNU General Public License v3.0
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Filter on ClinSig #36

Closed Char-Al closed 1 year ago

Char-Al commented 1 year ago

The filter on the clinsig field is complex...

When you want to filter only the "pathogenic" variant it is not obvious because you can have "conflicting_interpretation_of_pathogenicity".

Indeed, we filter on regexes containing "pathogenic" so it is inefficient.