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mobie / mobie-viewer-fiji

BSD 2-Clause "Simplified" License
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Blosc compression 'UnsatisfiedLinkError' #198

Closed K-Meech closed 3 years ago

K-Meech commented 3 years ago

Opening the newest version of MoBIE (built locally) - gives the error below on startup. It still runs perfectly fine though.

Compression 'org.janelia.saalfeldlab.n5.blosc.BloscCompression' could not me registered because:
java.lang.UnsatisfiedLinkError: Unable to load library 'blosc': Native library (win32-x86-64/blosc.dll) not found in resource path ([file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/charsets.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/deploy.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/access-bridge-64.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/cldrdata.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/dnsns.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/jaccess.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/jfxrt.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/localedata.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/nashorn.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/sunec.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/sunjce_provider.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/sunmscapi.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/sunpkcs11.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/ext/zipfs.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/javaws.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/jce.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/jfr.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/jfxswt.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/jsse.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/management-agent.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/plugin.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/resources.jar, file:/C:/Program%20Files/Java/jdk1.8.0_261/jre/lib/rt.jar, file:/C:/Users/meechan/Documents/Repos/mobie-viewer-fiji/target/classes/, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2/5.11.1/imglib2-5.11.1.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-cache/1.0.0-beta-16/imglib2-cache-1.0.0-beta-16.jar, file:/C:/Users/meechan/.m2/repository/com/github/ben-manes/caffeine/caffeine/2.4.0/caffeine-2.4.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-optional/1.0.0/scijava-optional-1.0.0.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/bigdataviewer-core/10.2.0/bigdataviewer-core-10.2.0.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-realtransform/3.1.0/imglib2-realtransform-3.1.0.jar, file:/C:/Users/meechan/.m2/repository/jitk/jitk-tps/3.0.1/jitk-tps-3.0.1.jar, file:/C:/Users/meechan/.m2/repository/com/googlecode/efficient-java-matrix-library/ejml/0.24/ejml-0.24.jar, file:/C:/Users/meechan/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-algorithm/0.11.2/imglib2-algorithm-0.11.2.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-roi/0.10.4/imglib2-roi-0.10.4.jar, file:/C:/Users/meechan/.m2/repository/net/sf/trove4j/trove4j/3.0.3/trove4j-3.0.3.jar, file:/C:/Users/meechan/.m2/repository/org/ojalgo/ojalgo/45.1.1/ojalgo-45.1.1.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/spim_data/2.2.4/spim_data-2.2.4.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-common/2.85.0/scijava-common-2.85.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/parsington/2.0.0/parsington-2.0.0.jar, file:/C:/Users/meechan/.m2/repository/org/bushe/eventbus/1.4/eventbus-1.4.jar, file:/C:/Users/meechan/.m2/repository/cisd/jhdf5/14.12.6/jhdf5-14.12.6.jar, file:/C:/Users/meechan/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar, file:/C:/Users/meechan/.m2/repository/commons-io/commons-io/2.7/commons-io-2.7.jar, file:/C:/Users/meechan/.m2/repository/org/jdom/jdom2/2.0.6/jdom2-2.0.6.jar, file:/C:/Users/meechan/.m2/repository/com/google/code/gson/gson/2.8.6/gson-2.8.6.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/ui-behaviour/2.0.3/ui-behaviour-2.0.3.jar, file:/C:/Users/meechan/.m2/repository/org/yaml/snakeyaml/1.26/snakeyaml-1.26.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-listeners/1.0.0-beta-3/scijava-listeners-1.0.0-beta-3.jar, file:/C:/Users/meechan/.m2/repository/org/janelia/saalfeldlab/n5/2.2.1/n5-2.2.1.jar, file:/C:/Users/meechan/.m2/repository/org/tukaani/xz/1.8/xz-1.8.jar, file:/C:/Users/meechan/.m2/repository/org/lz4/lz4-java/1.7.1/lz4-java-1.7.1.jar, file:/C:/Users/meechan/.m2/repository/org/apache/commons/commons-compress/1.20/commons-compress-1.20.jar, file:/C:/Users/meechan/.m2/repository/com/miglayout/miglayout-swing/5.2/miglayout-swing-5.2.jar, file:/C:/Users/meechan/.m2/repository/com/miglayout/miglayout-core/5.2/miglayout-core-5.2.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/bigdataviewer-vistools/1.0.0-beta-28/bigdataviewer-vistools-1.0.0-beta-28.jar, file:/C:/Users/meechan/.m2/repository/org/janelia/saalfeldlab/n5-aws-s3/3.1.3/n5-aws-s3-3.1.3.jar, file:/C:/Users/meechan/.m2/repository/com/amazonaws/aws-java-sdk-s3/1.11.796/aws-java-sdk-s3-1.11.796.jar, file:/C:/Users/meechan/.m2/repository/com/amazonaws/aws-java-sdk-kms/1.11.796/aws-java-sdk-kms-1.11.796.jar, file:/C:/Users/meechan/.m2/repository/com/amazonaws/aws-java-sdk-core/1.11.796/aws-java-sdk-core-1.11.796.jar, file:/C:/Users/meechan/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar, file:/C:/Users/meechan/.m2/repository/org/apache/httpcomponents/httpclient/4.5.12/httpclient-4.5.12.jar, file:/C:/Users/meechan/.m2/repository/org/apache/httpcomponents/httpcore/4.4.13/httpcore-4.4.13.jar, file:/C:/Users/meechan/.m2/repository/commons-codec/commons-codec/1.14/commons-codec-1.14.jar, file:/C:/Users/meechan/.m2/repository/software/amazon/ion/ion-java/1.0.2/ion-java-1.0.2.jar, file:/C:/Users/meechan/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.11.0/jackson-databind-2.11.0.jar, file:/C:/Users/meechan/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.11.0/jackson-annotations-2.11.0.jar, file:/C:/Users/meechan/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.11.0/jackson-core-2.11.0.jar, file:/C:/Users/meechan/.m2/repository/com/fasterxml/jackson/dataformat/jackson-dataformat-cbor/2.6.7/jackson-dataformat-cbor-2.6.7.jar, file:/C:/Users/meechan/.m2/repository/joda-time/joda-time/2.10.6/joda-time-2.10.6.jar, file:/C:/Users/meechan/.m2/repository/com/amazonaws/jmespath-java/1.11.796/jmespath-java-1.11.796.jar, file:/C:/Users/meechan/.m2/repository/org/janelia/saalfeldlab/n5-imglib2/3.5.1/n5-imglib2-3.5.1.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-label-multisets/0.9.0/imglib2-label-multisets-0.9.0.jar, file:/C:/Users/meechan/.m2/repository/org/slf4j/slf4j-api/1.7.30/slf4j-api-1.7.30.jar, file:/C:/Users/meechan/.m2/repository/org/janelia/saalfeldlab/n5-blosc/1.1.0/n5-blosc-1.1.0.jar, file:/C:/Users/meechan/.m2/repository/org/lasersonlab/jblosc/1.0.1/jblosc-1.0.1.jar, file:/C:/Users/meechan/.m2/repository/net/java/dev/jna/jna/4.5.2/jna-4.5.2.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/3D_Viewer/4.0.3/3D_Viewer-4.0.3.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/VIB-lib/2.2.0/VIB-lib-2.2.0.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/pal-optimization/2.0.1/pal-optimization-2.0.1.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/ij/1.53d/ij-1.53d.jar, file:/C:/Users/meechan/.m2/repository/gov/nist/math/jama/1.0.3/jama-1.0.3.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/j3dutils/1.6.0-scijava-2/j3dutils-1.6.0-scijava-2.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/vecmath/1.6.0-scijava-2/vecmath-1.6.0-scijava-2.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/j3dcore/1.6.0-scijava-2/j3dcore-1.6.0-scijava-2.jar, file:/C:/Users/meechan/.m2/repository/org/jogamp/gluegen/gluegen-rt/2.3.2/gluegen-rt-2.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/jogamp/jogl/jogl-all/2.3.2/jogl-all-2.3.2.jar, file:/C:/Users/meechan/.m2/repository/de/embl/cba/imagej-utils/0.6.0-SNAPSHOT/imagej-utils-0.6.0-20210228.142544-3.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/bigdataviewer_fiji/6.2.0/bigdataviewer_fiji-6.2.0.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-common/0.34.0/imagej-common-0.34.0.jar, file:/C:/Users/meechan/.m2/repository/edu/ucar/udunits/4.3.18/udunits-4.3.18.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-deprecated/0.1.4/imagej-deprecated-0.1.4.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-ij/2.0.0-beta-46/imglib2-ij-2.0.0-beta-46.jar, file:/C:/Users/meechan/.m2/repository/io/scif/scifio/0.41.1/scifio-0.41.1.jar, file:/C:/Users/meechan/.m2/repository/io/scif/scifio-jai-imageio/1.1.1/scifio-jai-imageio-1.1.1.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-ui/2.0.1/imglib2-ui-2.0.1.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/SPIM_Registration/5.0.21/SPIM_Registration-5.0.21.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/Fiji_Plugins/3.1.1/Fiji_Plugins-3.1.1.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/SPIM_Opener/2.0.2/SPIM_Opener-2.0.2.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/fiji-lib/2.1.2/fiji-lib-2.1.2.jar, file:/C:/Users/meechan/.m2/repository/sc/fiji/legacy-imglib1/1.1.9/legacy-imglib1-1.1.9.jar, file:/C:/Users/meechan/.m2/repository/edu/mines/mines-jtk/20151125/mines-jtk-20151125.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-algorithm-gpl/0.2.5/imglib2-algorithm-gpl-0.2.5.jar, file:/C:/Users/meechan/.m2/repository/net/imglib2/imglib2-algorithm-fft/0.2.0/imglib2-algorithm-fft-0.2.0.jar, file:/C:/Users/meechan/.m2/repository/mpicbg/mpicbg/1.4.1/mpicbg-1.4.1.jar, file:/C:/Users/meechan/.m2/repository/org/jfree/jfreechart/1.5.0/jfreechart-1.5.0.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-legacy/0.37.4/imagej-legacy-0.37.4.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/ij1-patcher/1.2.0/ij1-patcher-1.2.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-search/0.7.0/scijava-search-0.7.0.jar, file:/C:/Users/meechan/.m2/repository/org/ocpsoft/prettytime/prettytime/4.0.1.Final/prettytime-4.0.1.Final.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-table/0.7.0/scijava-table-0.7.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-ui-awt/0.1.7/scijava-ui-awt-0.1.7.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-ui-swing/0.13.2/scijava-ui-swing-0.13.2.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/swing-checkbox-tree/1.0.2/swing-checkbox-tree-1.0.2.jar, file:/C:/Users/meechan/.m2/repository/com/github/sbridges/object-inspector/object-inspector/0.1/object-inspector-0.1.jar, file:/C:/Users/meechan/.m2/repository/net/sourceforge/jdatepicker/jdatepicker/1.3.2/jdatepicker-1.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/script-editor/0.5.6/script-editor-0.5.6.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-java/0.4.1/scripting-java-0.4.1.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/minimaven/2.2.2/minimaven-2.2.2.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/batch-processor/0.4.1/batch-processor-0.4.1.jar, file:/C:/Users/meechan/.m2/repository/com/fifesoft/autocomplete/3.1.0/autocomplete-3.1.0.jar, file:/C:/Users/meechan/.m2/repository/com/fifesoft/languagesupport/3.1.0/languagesupport-3.1.0.jar, file:/C:/Users/meechan/.m2/repository/org/mozilla/rhino/1.7.6/rhino-1.7.6.jar, file:/C:/Users/meechan/.m2/repository/com/fifesoft/rsyntaxtextarea/3.1.1/rsyntaxtextarea-3.1.1.jar, file:/C:/Users/meechan/.m2/repository/org/javassist/javassist/3.27.0-GA/javassist-3.27.0-GA.jar, file:/C:/Users/meechan/.m2/repository/ome/bio-formats_plugins/6.5.1/bio-formats_plugins-6.5.1.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/ome-common/6.0.4/ome-common-6.0.4.jar, file:/C:/Users/meechan/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar, file:/C:/Users/meechan/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar, file:/C:/Users/meechan/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar, file:/C:/Users/meechan/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar, file:/C:/Users/meechan/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar, file:/C:/Users/meechan/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar, file:/C:/Users/meechan/.m2/repository/com/esotericsoftware/kryo/kryo/2.24.0/kryo-2.24.0.jar, file:/C:/Users/meechan/.m2/repository/com/esotericsoftware/minlog/minlog/1.2/minlog-1.2.jar, file:/C:/Users/meechan/.m2/repository/org/objenesis/objenesis/2.1/objenesis-2.1.jar, file:/C:/Users/meechan/.m2/repository/com/google/guava/guava/21.0/guava-21.0.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/ome-xml/6.1.0/ome-xml-6.1.0.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/specification/6.1.0/specification-6.1.0.jar, file:/C:/Users/meechan/.m2/repository/ome/formats-api/6.5.1/formats-api-6.5.1.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/ome-codecs/0.3.0/ome-codecs-0.3.0.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/ome-jai/0.1.0/ome-jai-0.1.0.jar, file:/C:/Users/meechan/.m2/repository/ome/formats-bsd/6.5.1/formats-bsd-6.5.1.jar, file:/C:/Users/meechan/.m2/repository/ome/turbojpeg/6.5.1/turbojpeg-6.5.1.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/native-lib-loader/2.3.4/native-lib-loader-2.3.4.jar, file:/C:/Users/meechan/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar, file:/C:/Users/meechan/.m2/repository/com/drewnoakes/metadata-extractor/2.11.0/metadata-extractor-2.11.0.jar, file:/C:/Users/meechan/.m2/repository/com/adobe/xmp/xmpcore/5.1.3/xmpcore-5.1.3.jar, file:/C:/Users/meechan/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar, file:/C:/Users/meechan/.m2/repository/xerces/xercesImpl/2.8.1/xercesImpl-2.8.1.jar, file:/C:/Users/meechan/.m2/repository/ome/formats-gpl/6.5.1/formats-gpl-6.5.1.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.2/ome-mdbtools-5.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/metakit/5.3.2/metakit-5.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/openmicroscopy/ome-poi/5.3.3/ome-poi-5.3.3.jar, file:/C:/Users/meechan/.m2/repository/edu/ucar/cdm/4.6.13/cdm-4.6.13.jar, file:/C:/Users/meechan/.m2/repository/edu/ucar/httpservices/4.6.13/httpservices-4.6.13.jar, file:/C:/Users/meechan/.m2/repository/org/apache/httpcomponents/httpmime/4.5.1/httpmime-4.5.1.jar, file:/C:/Users/meechan/.m2/repository/com/mchange/c3p0/0.9.5.3/c3p0-0.9.5.3.jar, file:/C:/Users/meechan/.m2/repository/com/mchange/mchange-commons-java/0.2.15/mchange-commons-java-0.2.15.jar, file:/C:/Users/meechan/.m2/repository/woolz/JWlz/1.4.0/JWlz-1.4.0.jar, file:/C:/Users/meechan/.m2/repository/org/json/json/20090211/json-20090211.jar, file:/C:/Users/meechan/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar, file:/C:/Users/meechan/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar, file:/C:/Users/meechan/.m2/repository/ch/qos/logback/logback-core/1.2.3/logback-core-1.2.3.jar, file:/C:/Users/meechan/.m2/repository/ch/qos/logback/logback-classic/1.2.3/logback-classic-1.2.3.jar, file:/C:/Users/meechan/.m2/repository/org/itc/image-transform-converters/0.1.3/image-transform-converters-0.1.3.jar, file:/C:/Users/meechan/.m2/repository/org/apache/commons/commons-math3/3.6.1/commons-math3-3.6.1.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej/2.2.0/imagej-2.2.0.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-launcher/6.0.1/imagej-launcher-6.0.1.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-notebook/0.7.1/imagej-notebook-0.7.1.jar, file:/C:/Users/meechan/.m2/repository/org/apache/commons/commons-text/1.8/commons-text-1.8.jar, file:/C:/Users/meechan/.m2/repository/org/knowm/xchart/xchart/3.5.4/xchart-3.5.4.jar, file:/C:/Users/meechan/.m2/repository/de/erichseifert/vectorgraphics2d/VectorGraphics2D/0.13/VectorGraphics2D-0.13.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-ops/0.45.5/imagej-ops-0.45.5.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-mesh/0.8.0/imagej-mesh-0.8.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-javascript/0.5.0/scripting-javascript-0.5.0.jar, file:/C:/Users/meechan/.m2/repository/org/joml/joml/1.9.25/joml-1.9.25.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-updater/0.10.5/imagej-updater-0.10.5.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-mesh-io/0.1.2/imagej-mesh-io-0.1.2.jar, file:/C:/Users/meechan/.m2/repository/org/smurn/jply/0.2.0/jply-0.2.0.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-plugins-batch/0.1.1/imagej-plugins-batch-0.1.1.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-plugins-commands/0.8.1/imagej-plugins-commands-0.8.1.jar, file:/C:/Users/meechan/.m2/repository/net/iharder/base64/2.3.8/base64-2.3.8.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-plugins-tools/0.3.1/imagej-plugins-tools-0.3.1.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-plugins-uploader-ssh/0.3.2/imagej-plugins-uploader-ssh-0.3.2.jar, file:/C:/Users/meechan/.m2/repository/com/jcraft/jsch/0.1.55/jsch-0.1.55.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-plugins-uploader-webdav/0.3.2/imagej-plugins-uploader-webdav-0.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/apache/jackrabbit/jackrabbit-webdav/2.21.1/jackrabbit-webdav-2.21.1.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-scripting/0.8.2/imagej-scripting-0.8.2.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-beanshell/0.3.4/scripting-beanshell-0.3.4.jar, file:/C:/Users/meechan/.m2/repository/org/apache-extras/beanshell/bsh/2.0b6/bsh-2.0b6.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-clojure/0.1.6/scripting-clojure-0.1.6.jar, file:/C:/Users/meechan/.m2/repository/org/clojure/clojure/1.8.0/clojure-1.8.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-groovy/0.3.0/scripting-groovy-0.3.0.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/groovy/groovy/3.0.4/groovy-3.0.4.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/groovy/groovy-dateutil/3.0.4/groovy-dateutil-3.0.4.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/groovy/groovy-json/3.0.4/groovy-json-3.0.4.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/groovy/groovy-swing/3.0.4/groovy-swing-3.0.4.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/groovy/groovy-templates/3.0.4/groovy-templates-3.0.4.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/groovy/groovy-xml/3.0.4/groovy-xml-3.0.4.jar, file:/C:/Users/meechan/.m2/repository/org/apache/ivy/ivy/2.4.0/ivy-2.4.0.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/gpars/gpars/1.2.1/gpars-1.2.1.jar, file:/C:/Users/meechan/.m2/repository/org/multiverse/multiverse-core/0.7.0/multiverse-core-0.7.0.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/jsr166-mirror/jsr166y/1.7.0/jsr166y-1.7.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-jruby/0.3.1/scripting-jruby-0.3.1.jar, file:/C:/Users/meechan/.m2/repository/org/jruby/jruby-core/9.1.17.0/jruby-core-9.1.17.0.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-netdb/1.1.6/jnr-netdb-1.1.6.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-enxio/0.16/jnr-enxio-0.16.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-x86asm/1.0.2/jnr-x86asm-1.0.2.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-unixsocket/0.17/jnr-unixsocket-0.17.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-posix/3.0.44/jnr-posix-3.0.44.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-constants/0.9.9/jnr-constants-0.9.9.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jffi/1.2.16/jffi-1.2.16.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jffi/1.2.16/jffi-1.2.16-native.jar, file:/C:/Users/meechan/.m2/repository/org/jruby/joni/joni/2.1.15/joni-2.1.15.jar, file:/C:/Users/meechan/.m2/repository/org/jruby/extras/bytelist/1.0.15/bytelist-1.0.15.jar, file:/C:/Users/meechan/.m2/repository/org/jruby/jcodings/jcodings/1.0.27/jcodings-1.0.27.jar, file:/C:/Users/meechan/.m2/repository/org/jruby/dirgra/0.3/dirgra-0.3.jar, file:/C:/Users/meechan/.m2/repository/com/headius/invokebinder/1.10/invokebinder-1.10.jar, file:/C:/Users/meechan/.m2/repository/com/headius/options/1.4/options-1.4.jar, file:/C:/Users/meechan/.m2/repository/com/headius/unsafe-fences/1.0/unsafe-fences-1.0.jar, file:/C:/Users/meechan/.m2/repository/com/jcraft/jzlib/1.1.3/jzlib-1.1.3.jar, file:/C:/Users/meechan/.m2/repository/com/martiansoftware/nailgun-server/0.9.1/nailgun-server-0.9.1.jar, file:/C:/Users/meechan/.m2/repository/com/headius/modulator/1.0/modulator-1.0.jar, file:/C:/Users/meechan/.m2/repository/org/jruby/jruby-stdlib/9.1.17.0/jruby-stdlib-9.1.17.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-jython/1.0.0/scripting-jython-1.0.0.jar, file:/C:/Users/meechan/.m2/repository/org/python/jython-slim/2.7.2/jython-slim-2.7.2.jar, file:/C:/Users/meechan/.m2/repository/org/antlr/antlr/3.5.2/antlr-3.5.2.jar, file:/C:/Users/meechan/.m2/repository/org/antlr/ST4/4.0.8/ST4-4.0.8.jar, file:/C:/Users/meechan/.m2/repository/javax/servlet/javax.servlet-api/3.1.0/javax.servlet-api-3.1.0.jar, file:/C:/Users/meechan/.m2/repository/org/antlr/antlr-runtime/3.5.2/antlr-runtime-3.5.2.jar, file:/C:/Users/meechan/.m2/repository/org/bouncycastle/bcpkix-jdk15on/1.62/bcpkix-jdk15on-1.62.jar, file:/C:/Users/meechan/.m2/repository/org/bouncycastle/bcprov-jdk15on/1.62/bcprov-jdk15on-1.62.jar, file:/C:/Users/meechan/.m2/repository/org/ow2/asm/asm/7.1/asm-7.1.jar, file:/C:/Users/meechan/.m2/repository/org/ow2/asm/asm-commons/7.1/asm-commons-7.1.jar, file:/C:/Users/meechan/.m2/repository/org/ow2/asm/asm-tree/7.1/asm-tree-7.1.jar, file:/C:/Users/meechan/.m2/repository/org/ow2/asm/asm-analysis/7.1/asm-analysis-7.1.jar, file:/C:/Users/meechan/.m2/repository/org/ow2/asm/asm-util/7.1/asm-util-7.1.jar, file:/C:/Users/meechan/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar, file:/C:/Users/meechan/.m2/repository/com/ibm/icu/icu4j/59.1/icu4j-59.1.jar, file:/C:/Users/meechan/.m2/repository/com/carrotsearch/java-sizeof/0.0.5/java-sizeof-0.0.5.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-ffi/2.1.10/jnr-ffi-2.1.10.jar, file:/C:/Users/meechan/.m2/repository/com/github/jnr/jnr-a64asm/1.0.0/jnr-a64asm-1.0.0.jar, file:/C:/Users/meechan/.m2/repository/jline/jline/2.14.5/jline-2.14.5.jar, file:/C:/Users/meechan/.m2/repository/io/netty/netty-buffer/4.1.45.Final/netty-buffer-4.1.45.Final.jar, file:/C:/Users/meechan/.m2/repository/io/netty/netty-codec/4.1.45.Final/netty-codec-4.1.45.Final.jar, file:/C:/Users/meechan/.m2/repository/io/netty/netty-common/4.1.45.Final/netty-common-4.1.45.Final.jar, file:/C:/Users/meechan/.m2/repository/io/netty/netty-handler/4.1.45.Final/netty-handler-4.1.45.Final.jar, file:/C:/Users/meechan/.m2/repository/io/netty/netty-resolver/4.1.45.Final/netty-resolver-4.1.45.Final.jar, file:/C:/Users/meechan/.m2/repository/io/netty/netty-transport/4.1.45.Final/netty-transport-4.1.45.Final.jar, file:/C:/Users/meechan/.m2/repository/org/apache/ant/ant/1.9.7/ant-1.9.7.jar, file:/C:/Users/meechan/.m2/repository/org/apache/ant/ant-launcher/1.9.7/ant-launcher-1.9.7.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-renjin/0.2.3/scripting-renjin-0.2.3.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/renjin-script-engine/0.8.1906/renjin-script-engine-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/renjin-core/0.8.1906/renjin-core-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/apache/commons/commons-math/2.2/commons-math-2.2.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/gcc-runtime/0.8.1906/gcc-runtime-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/netlib/netlib-java/0.9.3-renjin-patched-2/netlib-java-0.9.3-renjin-patched-2.jar, file:/C:/Users/meechan/.m2/repository/org/netlib/lapack/0.8/lapack-0.8.jar, file:/C:/Users/meechan/.m2/repository/org/netlib/f2jutil/0.8/f2jutil-0.8.jar, file:/C:/Users/meechan/.m2/repository/org/netlib/xerbla/0.8/xerbla-0.8.jar, file:/C:/Users/meechan/.m2/repository/org/netlib/blas/0.8/blas-0.8.jar, file:/C:/Users/meechan/.m2/repository/org/apache/commons/commons-vfs2/2.0/commons-vfs2-2.0.jar, file:/C:/Users/meechan/.m2/repository/org/apache/maven/scm/maven-scm-api/1.4/maven-scm-api-1.4.jar, file:/C:/Users/meechan/.m2/repository/org/codehaus/plexus/plexus-utils/1.5.6/plexus-utils-1.5.6.jar, file:/C:/Users/meechan/.m2/repository/org/apache/maven/scm/maven-scm-provider-svnexe/1.4/maven-scm-provider-svnexe-1.4.jar, file:/C:/Users/meechan/.m2/repository/org/apache/maven/scm/maven-scm-provider-svn-commons/1.4/maven-scm-provider-svn-commons-1.4.jar, file:/C:/Users/meechan/.m2/repository/regexp/regexp/1.3/regexp-1.3.jar, file:/C:/Users/meechan/.m2/repository/edu/emory/mathcs/jtransforms/2.4/jtransforms-2.4.jar, file:/C:/Users/meechan/.m2/repository/net/sf/jung/jung-api/2.0.1/jung-api-2.0.1.jar, file:/C:/Users/meechan/.m2/repository/net/sourceforge/collections/collections-generic/4.01/collections-generic-4.01.jar, file:/C:/Users/meechan/.m2/repository/net/sf/jung/jung-graph-impl/2.0.1/jung-graph-impl-2.0.1.jar, file:/C:/Users/meechan/.m2/repository/com/sun/codemodel/codemodel/2.6/codemodel-2.6.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/stats/0.8.1906/stats-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/renjin-appl/0.8.1906/renjin-appl-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/renjin-gnur-runtime/0.8.1906/renjin-gnur-runtime-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/methods/0.8.1906/methods-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/datasets/0.8.1906/datasets-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/utils/0.8.1906/utils-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/grDevices/0.8.1906/grDevices-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/renjin/graphics/0.8.1906/graphics-0.8.1906.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scripting-scala/0.2.2/scripting-scala-0.2.2.jar, file:/C:/Users/meechan/.m2/repository/org/scala-lang/scala-compiler/2.12.1/scala-compiler-2.12.1.jar, file:/C:/Users/meechan/.m2/repository/org/scala-lang/scala-library/2.12.1/scala-library-2.12.1.jar, file:/C:/Users/meechan/.m2/repository/org/scala-lang/scala-reflect/2.12.1/scala-reflect-2.12.1.jar, file:/C:/Users/meechan/.m2/repository/org/scala-lang/modules/scala-xml_2.12/1.0.6/scala-xml_2.12-1.0.6.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-ui-swing/0.23.2/imagej-ui-swing-0.23.2.jar, file:/C:/Users/meechan/.m2/repository/org/jhotdraw/jhotdraw/7.6.0/jhotdraw-7.6.0.jar, file:/C:/Users/meechan/.m2/repository/net/imagej/imagej-ui-awt/0.3.1/imagej-ui-awt-0.3.1.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-io-http/0.2.1/scijava-io-http-0.2.1.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-plugins-commands/0.2.3/scijava-plugins-commands-0.2.3.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-plugins-io-table/0.4.0/scijava-plugins-io-table-0.4.0.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-plugins-platforms/0.3.1/scijava-plugins-platforms-0.3.1.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-plugins-text-markdown/0.1.3/scijava-plugins-text-markdown-0.1.3.jar, file:/C:/Users/meechan/.m2/repository/org/markdownj/markdownj/0.3.0-1.0.2b4/markdownj-0.3.0-1.0.2b4.jar, file:/C:/Users/meechan/.m2/repository/org/scijava/scijava-plugins-text-plain/0.1.3/scijava-plugins-text-plain-0.1.3.jar, file:/C:/Users/meechan/.m2/repository/org/apache/commons/commons-lang3/3.10/commons-lang3-3.10.jar, file:/C:/Users/meechan/.m2/repository/com/github/mcib3d/mcib3d-core/3.96.3/mcib3d-core-3.96.3.jar, file:/C:/Users/meechan/.m2/repository/com/googlecode/combinatoricslib/combinatoricslib/2.0/combinatoricslib-2.0.jar, file:/C:/Users/meechan/.m2/repository/com/github/quickhull3d/quickhull3d/1.0.0/quickhull3d-1.0.0.jar, file:/C:/Users/meechan/.m2/repository/nz/ac/waikato/cms/weka/weka-dev/3.9.4/weka-dev-3.9.4.jar, file:/C:/Users/meechan/.m2/repository/com/github/vbmacher/java-cup/11b-20160615/java-cup-11b-20160615.jar, file:/C:/Users/meechan/.m2/repository/nz/ac/waikato/cms/weka/thirdparty/bounce/0.18/bounce-0.18.jar, file:/C:/Users/meechan/.m2/repository/com/googlecode/matrix-toolkits-java/mtj/1.0.4/mtj-1.0.4.jar, file:/C:/Users/meechan/.m2/repository/com/github/fracpete/jfilechooser-bookmarks/0.1.6/jfilechooser-bookmarks-0.1.6.jar, file:/C:/Users/meechan/.m2/repository/com/github/fracpete/jclipboardhelper/0.1.0/jclipboardhelper-0.1.0.jar, file:/C:/Users/meechan/.m2/repository/com/sun/istack/istack-commons-runtime/3.0.8/istack-commons-runtime-3.0.8.jar, file:/C:/Users/meechan/.m2/repository/jakarta/activation/jakarta.activation-api/1.2.1/jakarta.activation-api-1.2.1.jar, file:/C:/Users/meechan/.m2/repository/jakarta/xml/bind/jakarta.xml.bind-api/2.3.2/jakarta.xml.bind-api-2.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/glassfish/jaxb/jaxb-runtime/2.3.2/jaxb-runtime-2.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/glassfish/jaxb/txw2/2.3.2/txw2-2.3.2.jar, file:/C:/Users/meechan/.m2/repository/org/jvnet/staxex/stax-ex/1.8.1/stax-ex-1.8.1.jar, file:/C:/Users/meechan/.m2/repository/com/sun/xml/fastinfoset/FastInfoset/1.2.16/FastInfoset-1.2.16.jar, file:/C:/Users/meechan/.m2/repository/fr/inra/ijpb/MorphoLibJ_/1.4.2.1/MorphoLibJ_-1.4.2.1.jar, file:/C:/Users/meechan/.m2/repository/org/jetbrains/annotations/16.0.2/annotations-16.0.2.jar, file:/C:/Program%20Files/JetBrains/IntelliJ%20IDEA%20Community%20Edition%202020.2/lib/idea_rt.jar])
    at com.sun.jna.NativeLibrary.loadLibrary(NativeLibrary.java:303)
    at com.sun.jna.NativeLibrary.getInstance(NativeLibrary.java:427)
    at com.sun.jna.Native.register(Native.java:1647)
    at com.sun.jna.Native.register(Native.java:1360)
    at org.blosc.IBloscDll.<clinit>(IBloscDll.java:15)
    at org.blosc.JBlosc.init(JBlosc.java:30)
    at org.blosc.JBlosc.<init>(JBlosc.java:24)
    at org.janelia.saalfeldlab.n5.blosc.BloscCompression.<clinit>(BloscCompression.java:70)
    at java.lang.Class.forName0(Native Method)
    at java.lang.Class.forName(Class.java:264)
    at org.janelia.saalfeldlab.n5.CompressionAdapter.update(CompressionAdapter.java:83)
    at org.janelia.saalfeldlab.n5.CompressionAdapter.getJsonAdapter(CompressionAdapter.java:167)
    at org.janelia.saalfeldlab.n5.AbstractGsonReader.<init>(AbstractGsonReader.java:57)
    at org.janelia.saalfeldlab.n5.s3.N5AmazonS3Reader.<init>(N5AmazonS3Reader.java:203)
    at org.janelia.saalfeldlab.n5.s3.N5AmazonS3Reader.<init>(N5AmazonS3Reader.java:132)
    at de.embl.cba.mobie.n5.N5S3ImageLoader$N5AmazonS3ReaderCreator.create(N5S3ImageLoader.java:66)
    at de.embl.cba.mobie.n5.N5S3ImageLoader.<init>(N5S3ImageLoader.java:99)
    at de.embl.cba.mobie.n5.XmlIoN5S3ImageLoader.fromXml(XmlIoN5S3ImageLoader.java:81)
    at de.embl.cba.mobie.n5.XmlIoN5S3ImageLoader.fromXml(XmlIoN5S3ImageLoader.java:43)
    at mpicbg.spim.data.generic.sequence.XmlIoAbstractSequenceDescription.fromXml(XmlIoAbstractSequenceDescription.java:111)
    at mpicbg.spim.data.generic.XmlIoAbstractSpimData.fromXml(XmlIoAbstractSpimData.java:153)
    at mpicbg.spim.data.generic.XmlIoAbstractSpimData.load(XmlIoAbstractSpimData.java:95)
    at de.embl.cba.bdv.utils.BdvUtils.openSpimData(BdvUtils.java:1274)
    at de.embl.cba.bdv.utils.sources.LazySpimSource.initSpimData(LazySpimSource.java:89)
    at de.embl.cba.bdv.utils.sources.LazySpimSource.wrappedVolatileSource(LazySpimSource.java:66)
    at de.embl.cba.bdv.utils.sources.LazySpimSource.getType(LazySpimSource.java:137)
    at de.embl.cba.bdv.utils.sources.LazySpimSource.getType(LazySpimSource.java:48)
    at bdv.util.BdvFunctions.addSource(BdvFunctions.java:673)
    at bdv.util.BdvFunctions.show(BdvFunctions.java:224)
    at de.embl.cba.mobie.ui.viewer.SourcesPanel.addSourceToBDV(SourcesPanel.java:517)
    at de.embl.cba.mobie.ui.viewer.SourcesPanel.showIntensitySource(SourcesPanel.java:500)
    at de.embl.cba.mobie.ui.viewer.SourcesPanel.addSourceToViewer(SourcesPanel.java:464)
    at de.embl.cba.mobie.ui.viewer.SourcesPanel.addSourceToPanelAndViewer(SourcesPanel.java:437)
    at de.embl.cba.mobie.bookmark.BookmarkManager.addSourcesToPanelAndViewer(BookmarkManager.java:79)
    at de.embl.cba.mobie.bookmark.BookmarkManager.setView(BookmarkManager.java:52)
    at de.embl.cba.mobie.ui.viewer.MoBIEViewer.<init>(MoBIEViewer.java:85)
    at de.embl.cba.mobie.ui.command.OpenMoBIEPublishedProjectCommand.selectProject(OpenMoBIEPublishedProjectCommand.java:41)
    at de.embl.cba.mobie.ui.command.OpenMoBIEPublishedProjectCommand.run(OpenMoBIEPublishedProjectCommand.java:24)
    at org.scijava.command.CommandModule.run(CommandModule.java:196)
    at org.scijava.module.ModuleRunner.run(ModuleRunner.java:163)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:124)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:63)
    at org.scijava.thread.DefaultThreadService.lambda$wrap$2(DefaultThreadService.java:225)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)
tischi commented 3 years ago

@K-Meech Does that happen from within IntelliJ or within Fiji?

K-Meech commented 3 years ago

I just ran it from a local Fiji - and there's no error there. Just from intellij then. Any idea why there's different behaviour between the two?

constantinpape commented 3 years ago

Any idea why there's different behaviour between the two?

I think fji ships its own libblosc now, whereas intellij tries to find the system one.

K-Meech commented 3 years ago

Ah ok - makes sense.