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modernatx / seqlike

Unified biological sequence manipulation in Python
https://modernatx.github.io/seqlike
Apache License 2.0
207 stars 21 forks source link

Adding Damien Farrell as a contributor #58

Closed ericmjl closed 2 years ago

ericmjl commented 2 years ago

As mentioned by @ndousis in an earlier email thread, some of @dmnfarrell's code made it into this library. We would like to acknowledge @dmnfarrell as a contributor in the codebase.

@dmnfarrell is this something you would be amenable to? I would essentially ask the all-contributors bot to add your contribution in.

dmnfarrell commented 2 years ago

Hi. Yes that's fine. Thanks. Which particular code was used out of interest?

ericmjl commented 2 years ago

I believe @ndousis has the details, though if my memory serves right, it was the bokeh plotting code for multiple sequence alignments.

Thanks for getting back so fast, @dmnfarrell. I will be triggering the bits shortly.

ndousis commented 2 years ago

That's correct-- I used @dmnfarrell 's blog post as the basis for our interactive alignment viewer: https://dmnfarrell.github.io/bioinformatics/bokeh-sequence-aligner

There are credits buried in the view_alignment() docstring, but my apologies for not raising this sooner when we published the seqlike library.

ericmjl commented 2 years ago

@dmnfarrell I've noted in our README that you are a valued contributor to SeqLike! :tada: