c/ncmono prop diff, ct to clinvar, plots - Githubissues

molgenis / STEMI-scRNA-seq

single cell experiments in STEMI participants

https://eqtlgen.org/sc/datasets/blokland2024.html

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c/ncmono prop diff, ct to clinvar, plots #11

Closed royoelen closed 3 years ago

royoelen commented 3 years ago

added MAST for mono vs ncmono
added plots for mono vs ncmono proportions
added plot for sharing of DE genes between mono/cmono/ncmono
added script to read clinical parameters and match with monocyte proportions