correct permuted FDR in MatrixEQTL, peregrine container instructions, nichenet per-ct-per-ct - Githubissues

molgenis / STEMI-scRNA-seq

single cell experiments in STEMI participants

https://eqtlgen.org/sc/datasets/blokland2024.html

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correct permuted FDR in MatrixEQTL, peregrine container instructions, nichenet per-ct-per-ct #14

Closed royoelen closed 2 years ago

royoelen commented 2 years ago

peregrine instructions for singularity container
actually correct permuted FDR calculation
per-celltype-vs-per-celltype nichenet analyses