A method called just before writing fastq files collapses all lists of donor reads into one list. This method was modified to only add reads to the collapsed list if they are not already present. Read ID and pair number are used to establish uniqueness.
A method called just before writing fastq files collapses all lists of donor reads into one list. This method was modified to only add reads to the collapsed list if they are not already present. Read ID and pair number are used to establish uniqueness.