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molgenis
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vip
Variant Interpretation Pipeline
https://molgenis.github.io/vip/
GNU Lesser General Public License v3.0
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Multi-project getProbands, getHpoIds, createPedigree incorrect
#418
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dennishendriksen
closed
1 year ago
dennishendriksen
commented
1 year ago
considers all samples instead of project samples:
https://github.com/molgenis/vip/blob/v5.7.2/vip_vcf.nf#L145C85-L145C112
https://github.com/molgenis/vip/blob/v5.7.2/modules/vcf/inheritance.nf#L17
https://github.com/molgenis/vip/blob/v5.7.2/modules/vcf/report.nf#L29
considers all samples instead of project samples: