Closed dennishendriksen closed 1 year ago
End-to-end tests are not executed by Travis CI, please execute manually:
APPTAINER_BIND=$PWD bash test/test.sh
executing tests ... PASSED test_empty_input PASSED test_empty_output_filter PASSED test_empty_output_filter_samples PASSED test_multiproject_classify PASSED test_corner_cases PASSED test_snv_proband PASSED test_snv_proband_trio PASSED test_snv_proband_trio_sample_filtering PASSED test_snv_proband_trio_b38 PASSED test_lp PASSED test_lp_b38 PASSED test_lb PASSED test_lb_b38 all tests passed successfully executing tests ... PASSED gvcf PASSED gvcf_multiproject all tests passed successfully executing tests ... PASSED cram_nanopore PASSED cram_nanopore_duo PASSED bam PASSED cram FAILED cram_multiproject, see /groups/umcg-gcc/tmp01/umcg-dhendriksen/vip/test/output/cram_multiproject/.nxf.log <-- failed due to clair3 taking > 5 hours
End-to-end tests are not executed by Travis CI, please execute manually:
APPTAINER_BIND=$PWD bash test/test.shpasses