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molgenis / vip

Variant Interpretation Pipeline
https://molgenis.github.io/vip/
GNU Lesser General Public License v3.0
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feat:add miRNA annotation #583

Closed dennishendriksen closed 4 months ago

dennishendriksen commented 7 months ago 
running tests ...
vcf/aip                                  | PASSED | 204931=completed test/output/vcf/aip/.nxf.log
vcf/chd7                                 | PASSED | 204932=completed test/output/vcf/chd7/.nxf.log
vcf/corner_cases                         | PASSED | 204933=completed test/output/vcf/corner_cases/.nxf.log
vcf/deb_register                         | PASSED | 204934=completed test/output/vcf/deb_register/.nxf.log
vcf/empty_input                          | PASSED | 204935=completed test/output/vcf/empty_input/.nxf.log
vcf/empty_output_filter_samples          | PASSED | 204936=completed test/output/vcf/empty_output_filter_samples/.nxf.log
vcf/empty_output_filter                  | PASSED | 204937=completed test/output/vcf/empty_output_filter/.nxf.log
vcf/filter_samples                       | PASSED | 204938=completed test/output/vcf/filter_samples/.nxf.log
vcf/liftover                             | PASSED | 204939=completed test/output/vcf/liftover/.nxf.log
vcf/multiproject_classify                | PASSED | 204940=completed test/output/vcf/multiproject_classify/.nxf.log
vcf/mvid                                 | PASSED | 204941=completed test/output/vcf/mvid/.nxf.log
vcf/str                                  | PASSED | 204942=completed test/output/vcf/str/.nxf.log
vcf/trio                                 | PASSED | 204943=completed test/output/vcf/trio/.nxf.log
vcf/vkgl_lb                              | PASSED | 204944=completed test/output/vcf/vkgl_lb/.nxf.log
vcf/vkgl_lp                              | PASSED | 204945=completed test/output/vcf/vkgl_lp/.nxf.log
done
dennishendriksen commented 4 months ago

Won't work because of https://github.com/Ensembl/ensembl-vep/issues/1644#issuecomment-2122016460