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molikd / otb

Only The Best (Genome Assembly Tools)
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samtools flagstat, multiple bam files #1

Closed scottgeib closed 3 years ago

scottgeib commented 3 years ago

capture multiple bams as a list, loop through and run flagstat once per bam. This is sanity check for the bams being the right size, having correct number of reads, etc.

molikd commented 3 years ago

a47560b should fix this.

molikd commented 3 years ago

fixed as of last round of tests.