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molikd / otb

Only The Best (Genome Assembly Tools)
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rewrite check fastq process? #30

Closed molikd closed 2 years ago

molikd commented 2 years ago

nf-core?

molikd commented 2 years ago

should I just remove the mod four check? and how do I handle bam files?

Choices: try fastqc? (more for short read)

Maybe we just warn instead of error in the fastq files?

molikd commented 2 years ago

went ahead with the warn behavior in e8d93a9