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molikd / otb

Only The Best (Genome Assembly Tools)
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gfa2fasta error in phasing mode #46

Closed molikd closed 2 years ago

molikd commented 2 years ago

this line in gfa2fasta needs to be updated to the genomes of any of the HiFiASM modes, namely in phasing mode hic.p_ctg is the genome

file '*.bp.p_ctg.gfa.fasta' optional true into fasta_unoriented_ch, fasta_genome_ch, fasta_busco_ch, no_polish_yahs_align_genome_ch, fasta_fai_yahs_genome_ch