problem with phase difference image

moloney / dcmstack

DICOM to Nifti conversion with meta data preservation

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problem with phase difference image #22

Closed juhuntenburg closed 10 years ago

juhuntenburg commented 10 years ago

I'm having trouble converting gre fieldmap dicoms (siemens scanner) to nifti and am wondering what's going wrong. The following worked perfectly on the magnitude images but failed for the phase difference image:

dcmstack --dest-dir OUTPUT_DIR --file-ext '' SOURCE_DIR

Please find the dicoms, resulting nifti (dcm2nii worked) and error here: https://www.dropbox.com/sh/i1scybtw1grcvmn/EXy_4-tx-G

moloney commented 10 years ago

Just tested and this works fine for me. Which versions of dcmstack and pydicom are you using?

chrisgorgo commented 10 years ago

I can confirm that it works with the newest version of pydicom. You can close this issues. Thanks Julia for reporting!