This is a branch off of motif-maker which is up for PR in #103 and is BLOCKED till that is merged. The base branch will be updated to dev after 103 is merged.
Goal:
Updates to Motif Testing
Use MotifFile object where appropriate
Speed up alignments:
On dev we are passing around a results hashmap between functions. By doing so we are increasing the time of alignment requests by ~20 seconds.
By eliminating streams we were able to speed up the alignment request as well
This is a branch off of
motif-maker
which is up for PR in #103 and is BLOCKED till that is merged. The base branch will be updated to dev after 103 is merged.Goal:
MotifFile
object where appropriatedev
we are passing around aresults
hashmap between functions. By doing so we are increasing the time of alignment requests by ~20 seconds.Dev Change: