NameError: global name 'sex_output' is not defined

[hlabathems]

----- derive optimium photometry aperture

• extract sources from 2 images using 20 apertures ERROR: mscience0218.ldac seems to be empty; check LOG file if Source Extractor ran properly ERROR: mscience0217.ldac seems to be empty; check LOG file if Source Extractor ran properly Traceback (most recent call last): File "/Users/michaelhlabathe/photometrypipeline/pp_run", line 409, in fixed_aprad, source_tolerance) File "/Users/michaelhlabathe/photometrypipeline/pp_run", line 252, in run_the_pipeline diagnostics=True) File "/Users/michaelhlabathe/photometrypipeline/pp_photometry.py", line 374, in photometry diagnostics=diagnostics) File "/Users/michaelhlabathe/photometrypipeline/pp_photometry.py", line 91, in curve_of_growth_analysis extraction = pp_extract.extract_multiframe(filenames, extractparameters) File "/Users/michaelhlabathe/photometrypipeline/pp_extract.py", line 268, in extract_multiframe output = pool.map(extract_singleframe, data) File "/Users/michaelhlabathe/anaconda2/lib/python2.7/multiprocessing/pool.py", line 251, in map return self.map_async(func, iterable, chunksize).get() File "/Users/michaelhlabathe/anaconda2/lib/python2.7/multiprocessing/pool.py", line 567, in get raise self._value NameError: global name 'sex_output' is not defined

[mommermi]

can you do a git pull and try again? If the problem persists, can you go into diagnostics/LOG and search for call Source Extractor as:? The line that follows this snippet refers to the Source Extractor call. If you run that call separately in the terminal, what does it say?

[hlabathems]

It gives me this when I ran it separately

sex -c /Users/michaelhlabathe/photometrypipeline/setup/vatt4k.sex -PHOT_APERTURES 4.0,4.84210526316,5.68421052632,6.52631578947,7.36842105263,8.21052631579,9.05263157895,9.89473684211,10.7368421053,11.5789473684,12.4210526316,13.2631578947,14.1052631579,14.9473684211,15.7894736842,16.6315789474,17.4736842105,18.3157894737,19.1578947368,20.0 -BACKPHOTO_TYPE LOCAL -DETECT_MINAREA 12.000000 -DETECT_THRESH 1.500000 -ANALYSIS_THRESH 1.500000 -CATALOG_NAME mscience0217.ldac -PARAMETERS_NAME /Users/michaelhlabathe/photometrypipeline/setup/twentyapertures.sexparam mscience0217.fits

WARNING: DETECT_MAXAREA keyword unknown

WARNING: RESCALE_WEIGHTS keyword unknown

WARNING: SATUR_KEY keyword unknown

WARNING: GAIN_KEY keyword unknown

WARNING: ASSOCCOORD_TYPE keyword unknown

WARNING: HEADER_SUFFIX keyword unknown

WARNING: PATTERN_TYPE keyword unknown

----- SExtractor 2.5.0 started on 2017-11-03 at 09:26:56 with 1 thread

Measuring from: "3552" / 2032 x 2032 / 64 bits FLOATING POINT data

Error in WCSlib: Invalid linear transformation parameters

On 2017-11-03 06:13, Michael Mommert wrote:

can you do a git pull and try again? If the problem persists, can you go into diagnostics/LOG and search for call Source Extractor as:? The line that follows this snippet refers to the Source Extractor call. If you run that call separately in the terminal, what does it say?

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Links:

[1] https://github.com/mommermi/photometrypipeline/issues/30#issuecomment-341619310 [2] https://github.com/notifications/unsubscribe-auth/AEewQCVJEGgSco-Bq05DZcHtymMf4YOfks5sypLYgaJpZM4QPzGn

[mommermi]

Thanks! You are using an old version of Source Extractor (2.5.0), can you try the latext version (2.19.5)? That should fix your problem.

[hlabathems]

Running the latest version worked, thanks:)

On 2017-11-03 17:12, Michael Mommert wrote:

Thanks! You are using an old version of Source Extractor (2.5.0), can you try the latext version (2.19.5)? That should fix your problem.

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Links:

[1] https://github.com/mommermi/photometrypipeline/issues/30#issuecomment-341731889 [2] https://github.com/notifications/unsubscribe-auth/AEewQPMOwDJNZ0oLaMSYkCc9CBCpj7Wcks5syy1ggaJpZM4QPzGn