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monagrland / MB_Pipeline

Metabarcoding Pipeline for Illumina Sequencing Data
GNU Affero General Public License v3.0
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Manage file-sample relationship in a config file #10

Closed kbseah closed 9 months ago

kbseah commented 1 year ago

Samples are currently labeled indirectly by combining forward and reverse barcode labels.

Semantically more accurate to separate the two. Would also enable easier adaptation of pipeline to already-demuxed datasets.

kbseah commented 1 year ago

Avoid having to impose filename pattern on user

Allow combining arbitrary number of read files per sample (e.g. additional sequencing of same libraries)

kbseah commented 9 months ago

resolved in #13