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monagrland
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MB_Pipeline
Metabarcoding Pipeline for Illumina Sequencing Data
GNU Affero General Public License v3.0
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Reorganize workflow files to Snakemake guidelines
#22
Closed
kbseah
closed
9 months ago
kbseah
commented
9 months ago
Breaking change: Reorganize workflow files to Snakemake guidelines (as discussed in issue #17)
Update Snakemake code to v8, enforce minimum version (#19 )
Let user specify alternative ref databases and alternative methods for taxonomic classification (#21 ) - current options: multilvl, sintax
Update documentation for pipeline and config files (#15 )
Bug fixes:
Fixed bug with zero-length sequences after cutadapt trimming #16
Pin updated dnoise version with fix for bug #20