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monarch-initiative / HpoCaseAnnotator

Next-generation Biocuration App for annotating cases and PhenoPackets
https://hpocaseannotator.readthedocs.io/en/latest/index.html
BSD 3-Clause "New" or "Revised" License
8 stars 0 forks source link

store data broken #19

Closed pnrobinson closed 5 years ago

pnrobinson commented 5 years ago

HpoCaseAnnotator does not store data about the paths etc between program runs. The data should be written to the .hpo-case-annotator config file.

ielis commented 5 years ago

Which paths do you mean? The paths to OBO, gene, FASTA files, and also the path to directory with biocuration data are being preserved.

pnrobinson commented 5 years ago

I need to reenter these paths every time I start the program. How are they getting saved? I will try to debug this

ielis commented 5 years ago

The paths are being serialized here.

pnrobinson commented 5 years ago

Weird, I cannot reproduce this error now. I wonder if it has something to do with starting the app from inetellij vs shell.