Consolidate 'nutritional restriction/avoidance' tickets and add to pattern(s)

[LCCarmody]

Trying to consolidate several tickets. Will close tickets, but go back to closed tickets for defs/PMID xrefs.

82 #83 #93 #4 #48 # #95

	Term	In MAXO	Notes:
- [x]	isoleucine restricted diet	no
- [ ]	dietary precursor restriction diet	no
- [x]	dietary protein restricion	yes
- [ ]	Iron chelation	no
- [x]	arginine restriction (or avoidance?)	no
- [x]	lysine restriction	no
- [x]	methione restriction	no
- [x]	glycine restriction	no
- [x]	Dietary restriction branched amino-acids	no
- [x]	phenylalanine restriction	yes	#82
- [ ]	low fat diet	no
- [x]	tyrosine restriction	no	#82
- [ ]	fasting avoidance	yes
- [x]	gluten avoidance		#83
- [x]	Sodium avoidance		#83
- [x]	galactose free diet	no	#93
- [x]	cholesterol restriction
- [x]	ascorbate restriction		#48
- [x]	iron restriction		#48
- [x]	ascorbic acid restriction		#48
- [x]	branched chain amino acid restriction	#95

[laurenechan]

@LCCarmody Looking some more through gene reviews, we may also include some of these terms to our nutrition intake avoidance pattern:

Refsum disease

• [x] phytanic acid restriction
• includes full fat cow's milk and high fat meat products from ruminants
• [x] avoid ketosis
• [x] avoid sudden weight loss

Sitosterolemia

• [x] plant sterol restriction
• including: (vegetable oils, margarine, nuts, seeds, avocados, and chocolate)
• [x] shellfish sterol restriction (specific type of cholesterol)

Primary trimethylaminuria

• [x] restriction of Trimethylamine
• (present in milk obtained from wheat-fed cows)
• [x] restriction of choline
• (present in eggs, liver, kidney, peas, beans, peanuts, soya products, and brassicas [Brussels sprouts, broccoli, cabbage, cauliflower]),
• [x] restriction of lecithin and lecithin-containing fish oil supplements
• [x] restriction of Trimethylamine N-oxide (present in seafood [fish, cephalopods, and crustaceans]);
• [x] restriction of Inhibitors of FMO3 enzyme activity such as indoles (found in brassicas).

Phosphoribosylpyrophosphate Synthetase Superactivity

• [x] avoid high purine meats
• [x] restrict dietary purines
• [x] avoid shellfish
• [x] avoid oily fish
• I know we have seafood product intake avoidance, would we like these specific terms?
• [x] avoid beer
• [x] restrict dietary fructose
• [x] avoid high fructose corn syrup

Lysinuric Protein Intolerance

• [x] avoid excess nitrogen consumption

Pyruvate carboxylase deficiency

• [x] avoid ketogenic diet

Epimerase Deficiency Galactosemia

• [x] lactose avoidance
• [x] galactose avoidance

Dihydrolipoamide Dehydrogenase Deficiency & Maple Syrup Urine Disease

• [x] dietary leucine restriction

Primary Hyperoxaluria Type 2.

• [x] dietary oxalate restriction

Polycystic Kidney Disease, Autosomal Dominant.

• [x] dietary phosphorus/phosphate restriction

Autosomal Dominant Tubulointerstitial Kidney Disease, REN-Related.

• [x] avoid low sodium diet

Familial Hypercholesterolemia

• [x] restrict dietary saturated fat intake

HTRA1 Disorder

• [x] avoid high salt diet (did not specify what specific salt(s))

Dent Disease

• [x] dietary calcium restriction

Fructose-1,6-Bisphosphatase Deficiency

• [x] dietary restriction of sucrose

Biotinidase Deficiency

• [x] avoid raw egg consumption

Hyperphosphatemic Familial Tumoral Calcinosis

• [x] avoid excess vitamin D intake

Hereditary Fructose Intolerance

• [x] avoid dietary sorbitol

Lysosomal Acid Lipase Deficiency

• [x] dietary restriction of triglycerides

Duarte Variant Galactosemia.

• [x] avoid human milk consumption
• [x] avoid bovine milk consumption
• [ ] avoid galactose containing formula consumption

Isolated Methylmalonic Acidemia.

• [ ] Diet low in propiogenic amino acid precursors
• is this well enough covered with dietary precursor restriction diet

Glycogen Storage Disease Type I & Hyperkalemic Periodic Paralysis

• [x] avoid fruit consumption
• [x] avoid fruit juice consumption
• [x] avoid cane juice consumption

Familial Porphyria Cutanea Tarda

• [x] avoid organ meat consumption

Riboflavin Transporter Deficiency Neuronopathy.

• [x] avoid dietary restriction of riboflavin (vitamin B2)

Hereditary Coproporphyria

• [ ] Avoid extreme diets (e.g. all bacon, all brown rice, starvation)
• a little specific here with the examples, yet very broad with the term itself, do we want all these?

I think we have all of these, but just to be sure: avoid high/excess carbohydrate diet avoid high/excess protein diet avoid high/excess fat diet these are seen through a variety of rare diseases but all are seen at least once.

[LCCarmody]

Creating a CHEBI avoidance_of_food_intake pattern to take care of many of these terms. DIet terms are being dealt with elsewhere.

[LCCarmody]

I have added many of these terms. A handful of others have moved to other tickets or need to be longer discussions with the food community.