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monarch-initiative / biolink-api

API for linked biological knowledge
https://api.monarchinitiative.org/api/
BSD 3-Clause "New" or "Revised" License
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ribbon / slimmer function: add gene symbol for display in with column #208

Closed nathandunn closed 6 years ago

nathandunn commented 6 years ago

https://github.com/geneontology/ribbon/issues/46

deepakunni3 commented 6 years ago

Would it be possible to add more details from the JIRA ticket?

nathandunn commented 6 years ago

I think that's it ;) .

Basically everything in the with or Based on table, but especially genes should be translated to the appropriate symbol. From here: https://www.alliancegenome.org/gene/RGD:620615

screen shot 2018-08-27 at 10 55 47 pm
nathandunn commented 6 years ago

If the symbol is available, could just be provided an another field (and name if it is there, though I can't imagine it would be used).

selewis commented 6 years ago

This is the same as #209 (it's NOT allele IDs). Here's the answer:

Basically it's about what is being returned in the response. Right now in the JSON field being returned labeled "evidence_with" there is just a simple list of ids. It would be be preferred if each entry in this "evidence_with" list looked similar to the "subject" entry and included - label, id, and taxon - for each entry.

selewis commented 6 years ago

Same as #209 so closing