The latest release of monarch allows one to disambiguate causal and non-causal gene to disease associations by setting the association_type filter:
causal: fq=association_type:gene_disease
non-causal: fq=association_type:marker_disease
both: fq=association_type:(gene_disease OR marker_disease)
This could be added as a new parameter, with both as the default to not maintain backwards compatibility.
The latest release of monarch allows one to disambiguate causal and non-causal gene to disease associations by setting the association_type filter: causal: fq=association_type:gene_disease non-causal: fq=association_type:marker_disease both: fq=association_type:(gene_disease OR marker_disease)
This could be added as a new parameter, with both as the default to not maintain backwards compatibility.