monarch-initiative / biolink-api

API for linked biological knowledge
https://api.monarchinitiative.org/api/
BSD 3-Clause "New" or "Revised" License
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Add scigraph clique and candidate clique endpoints to biolink (dupe see #55) #359

Closed kshefchek closed 3 years ago

kshefchek commented 3 years ago

Some time ago I added two functions to scigraph:

/dynamic/candidateClique/{id} Returns ids that are equivalent and potentially equivalent (xrefs)

/dynamic/clique/{id} Returns the id and all its equivalents

should we add this functionality to biolink? this probably makes sense as a single function with params that specify how strict a user wants - equivalent, exactMatch, narrowMatch, broad, dbxref, proteins for genes, etc

cc @balhoff @mbrush

kshefchek commented 3 years ago

also related https://github.com/biolink/biolink-api/issues/346

kshefchek commented 3 years ago

exact same ticket from 2017 https://github.com/biolink/biolink-api/issues/55