monarch-initiative / curate-gpt

LLM-driven curation assist tool (pre-alpha)
https://monarch-initiative.github.io/curate-gpt/
BSD 3-Clause "New" or "Revised" License
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Auto-KB: Adding more automation functions #41

Closed cmungall closed 4 weeks ago

cmungall commented 4 weeks ago

This PR adds

commands and operations

update allows individual fields to be updated; for example, if only some of your records have description, this will populate others (using RAG)

the review command will ask the LLM to be a critic, and evaluate individual assertions using its own latent KB, guided by the curator.

A new output format is supported, "patch" which makes it easier to use these commands as part of a curation cycle

It also enhances the citeseek function to allow for weaving in multiple pieces of evidence (dynamically retrieved from pubmed) to complex objects.

Also adds two wrappers