monarch-initiative / dipper

Data Ingestion Pipeline for Monarch
https://dipper.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
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add banding maps for aqtl species #161

Open nlwashington opened 9 years ago

nlwashington commented 9 years ago

we can get the genetic locations from here: http://www.animalgenome.org/hu/share/GbandCoord.tar.gz

Please also acknowledge Andy Law from Roslin.

These will need to be mapped to genomic coordinates using various landmarks. This can be done with the tool http://pbil.univ-lyon1.fr/software/mareymap/index.php.

nlwashington commented 9 years ago

some of the interpolated genomic positions might be available through http://www.thearkdb.org/arkdb/do/getMappingDetails?accession=ARKPHY00002382