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monarch-initiative / genophenocorr

Genotype Phenotype Correlation
https://monarch-initiative.github.io/genophenocorr/stable
MIT License
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Consider adding a step for inferring excluded features for a cohort #48

Open ielis opened 9 months ago

ielis commented 9 months ago

Consider adding a step into the Cohort ETL pipeline that will infer exclusion of a phenotypic feature if not explicitly present in the phenopacket.

The inference must account for the other phenotypic features of the patient to ensure no logical inconsistencies are introduced.

lnrekerle commented 2 weeks ago

Is this covered in the Heuristic Strategy? Or could it be added to it? @pnrobinson @ielis

ielis commented 2 weeks ago

No, it is not, but this is a low-priority, in my opinion. Let's leave it for now.