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monarch-initiative / medgen

MedGen ingest.
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MedGen build failure #22

Open joeflack4 opened 7 months ago

joeflack4 commented 7 months ago

Overview

This is a new error following #18 being merged. I think what happened is that I ran the action successfully, made some changes, and then forgot to check if the action ran successfully again.

I think the problem has to do with the sssom-py version being different between my local environment and the action's.

Error information

ImportError: cannot import name 'MappingSetDataFrame' from 'sssom'

Log

matentzn commented 7 months ago

I think MappingSetDataFrame is in sssom.utils

joeflack4 commented 7 months ago

Hey, thx. It works locally. In my local copy of sssom-py, when I look at __init__.py, it's there:

from sssom.util import (  # noqa:401
    MappingSetDataFrame,

But I will try your suggestion! I'm guessing it will probably work.