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monarch-initiative / monarch-app

Monarch Initiative website and API
https://monarchinitiative.org/
BSD 3-Clause "New" or "Revised" License
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Spacy git dependency breaks pypi deploy #809

Open kevinschaper opened 2 days ago

kevinschaper commented 2 days ago

Our deploys of monarch-py as a library have been failing for a while, it looks like we need to get our spacy dependency pointed at a release version.

Using a plaintext file to store credentials

Publishing monarch-py (v1.8.0-rc2) to PyPI
 - Uploading monarch_py-1.8.0rc2-py3-none-any.whl 0%

 - Uploading monarch_py-1.8.0rc2-py3-none-any.whl 100%
HTTP Error 400: Can't have direct dependency: spacy@ git+https://github.com/explosion/spaCy.git@master. See https://packaging.python.org/specifications/core-metadata for more information. | b"<html>\n <head>\n  <title>400 Can't have direct dependency: spacy@ git+https://github.com/explosion/spaCy.git@master. See https://packaging.python.org/specifications/core-metadata for more information.\n \n <body>\n  <h1>400 Can't have direct dependency: spacy@ git+https://github.com/explosion/spaCy.git@master. See https://packaging.python.org/specifications/core-metadata for more information.\n  The server could not comply with the request since it is either malformed or otherwise incorrect.<br/><br/>\nCan&#x27;t have direct dependency: spacy@ git+https://github.com/explosion/spaCy.git@master. See https://packaging.python.org/specifications/core-metadata for more information.\n\n\n \n"
Error: Process completed with exit code 1.
kevinschaper commented 1 day ago

I fixed the initial dependency problem, but it looks like it's not very happy about the model dependency either: 

TTP Error 400: Can't have direct dependency: en_core_sci_sm@ https://s3-us-west-2.amazonaws.com/ai2-s2-scispacy/releases/v0.5.4/en_core_sci_sm-0.5.4.tar.gz. 

See https://packaging.python.org/specifications/core-metadata for more information. | b"<html>\n <head>\n  <title>400 Can't have direct dependency: en_core_sci_sm@ https://s3-us-west-2.amazonaws.com/ai2-s2-scispacy/releases/v0.5.4/en_core_sci_sm-0.5.4.tar.gz. 

See https://packaging.python.org/specifications/core-metadata for more information.\n \n <body>\n  <h1>400 Can't have direct dependency: en_core_sci_sm@ https://s3-us-west-2.amazonaws.com/ai2-s2-scispacy/releases/v0.5.4/en_core_sci_sm-0.5.4.tar.gz. 

See https://packaging.python.org/specifications/core-metadata for more information.\n  The server could not comply with the request since it is either malformed or otherwise incorrect.<br/><br/>\nCan&#x27;t have direct dependency: en_core_sci_sm@ https://s3-us-west-2.amazonaws.com/ai2-s2-scispacy/releases/v0.5.4/en_core_sci_sm-0.5.4.tar.gz. See https://packaging.python.org/specifications/core-metadata for more information.\n\n\n \n"